Structure of PDB 7z1i Chain B Binding Site BS01

Receptor Information

>7z1i Chain B (length=493) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

EFVCEENEPFTCNQTKLFNSGNFEKGFIFGVASSAYQVEGGRGRGLNVWD
SFTHRFPEKGGADLGNGDTTCDSYTLWQKDIDVMDELNSTGYRFSIAWSR
LLPKGKRSRGVNPGAIKYYNGLIDGLVAKNMTPFVTLFHWDLPQTLQDEY
NGFLNKTIVDDFKDYADLCFELFGDRVKNWITINQLYTVPTRGYALGTDA
PGRCSPKIDVRCPGGNSSTEPYIVAHNQLLAHAAAVDVYRTKYKDDQKGM
IGPVMITRWFLPFDHSQESKDATERAKIFFHGWFMGPLTEGKYPDIMREY
VGDRLPEFSETEAALVKGSYDFLGLNYYVTQYAQNNQTIVPSDVHTALMD
SRTTLTSKNATGHAPGPPFNAASYYYPKGIYYVMDYFKTTYGDPLIYVTE
NGFSTPGDEDFEKATADYKRIDYLCSHLCFLSKVIKEKNVNVKGYFAWSL
GDNYEFCNGFTVRFGLSYVDFANITGDRDLKASGKWFQKFINV

Ligand information

Ligand ID

InChI

InChI=1S/Ca/q+2

InChIKey

BHPQYMZQTOCNFJ-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Ca++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Ca+2]

Formula

Name

CALCIUM ION

PDB chain

7z1i Chain A Residue 608 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	7z1i Plant myrosinase TGG1 from Arabidopsis thaliana
Resolution	3.09 Å
Binding residue (original residue number in PDB)	H74 D88
Binding residue (residue number reindexed from 1)	H54 D68
Annotation score	4

Enzymatic activity

Enzyme Commision number

3.2.1.147: thioglucosidase.
3.2.1.21: beta-glucosidase.

Gene Ontology

	Molecular Function
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

	Biological Process
GO:0005975	carbohydrate metabolic process

View graph for
Molecular Function

View graph for
Biological Process

External links

PDB	RCSB:7z1i, PDBe:7z1i, PDBj:7z1i
PDBsum	7z1i
PubMed
UniProt	P37702\|BGL38_ARATH Myrosinase 1 (Gene Name=TGG1)

[Back to BioLiP]