Structure of PDB 7yem Chain B Binding Site BS01

Receptor Information
>7yem Chain B (length=431) Species: 192952 (Methanosarcina mazei Go1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LVPRGSHMNPKRIRALKSGKQGDGPVVYWMSRDQRAEDNWALLFSRAIAK
EANVPVVVVFCLTDEFGIRQYEFMLKGLQELEVSLSRKKIPSFFLRGDPG
EKISRFVKDYNAGTLVTDFSPLRIKNQWIEKVISGISIPFFEVDAHNVVP
CWEASQKHEYAAHTFRPKLYALLPEFLEEFPELEPNSVTPDPLFEPWHFE
PGEKAAKKVMESFIADRLDSYGALRNDPTKNMLSNLSPYLHFGQISSQRV
VLEVEKAESNPGSKKAFLDEILIWKEISDNFCYYNPGYDGFESFPSWAKE
SLNAHRNDVRSHIYTLEEFEAGKTHDPLWNASQMELLSTGKMHGYTRMYW
AKKILEWSESPEKALEIAICLNDRYELDGRDPNGYAGIAWSIGGVHDRAW
GEREVTGKIRYMSYEGCKRKFDVKLYIEKYS
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7yem Visualizing the DNA repair process by a photolyase at atomic resolution
Resolution2.6 Å
Binding residue
(original residue number in PDB)		H161 R164 R256 W305 M379 W431 R441 Y442 M443 S444 R450 K451
Binding residue
(residue number reindexed from 1)		H163 R166 R225 W274 M348 W400 R410 Y411 M412 S413 R419 K420
Enzymatic activity
Enzyme Commision number 4.1.99.3: deoxyribodipyrimidine photo-lyase.
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003677 DNA binding
GO:0003904 deoxyribodipyrimidine photo-lyase activity
GO:0016829 lyase activity
Biological Process
GO:0000719 photoreactive repair
GO:0006281 DNA repair

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Molecular Function
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Biological Process
External links
PDB RCSB:7yem, PDBe:7yem, PDBj:7yem
PDBsum7yem
PubMed38033054
UniProtQ8PYK9

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