Structure of PDB 7yek Chain B Binding Site BS01

Receptor Information
>7yek Chain B (length=432) Species: 192952 (Methanosarcina mazei Go1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LVPRGSHMNPKRIRALKSGKQGDGPVVYWMSRDQRAEDNWALLFSRAIAK
EANVPVVVVFCLTDEFLGIRQYEFMLKGLQELEVSLSRKKIPSFFLRGDP
GEKISRFVKDYNAGTLVTDFSPLRIKNQWIEKVISGISIPFFEVDAHNVV
PCWEASQKHEYAAHTFRPKLYALLPEFLEEFPELEPNSVTPDPLFEPWHF
EPGEKAAKKVMESFIADRLDSYGALRNDPTKNMLSNLSPYLHFGQISSQR
VVLEVEKAESNPGSKKAFLDEILIWKEISDNFCYYNPGYDGFESFPSWAK
ESLNAHRNDVRSHIYTLEEFEAGKTHDPLWNASQMELLSTGKMHGYTRMY
WAKKILEWSESPEKALEIAICLNDRYELDGRDPNGYAGIAWSIGGVHDRA
WGEREVTGKIRYMSYEGCKRKFDVKLYIEKYS
Ligand information
Receptor-Ligand Complex Structure
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PDB7yek Visualizing the DNA repair process by a photolyase at atomic resolution
Resolution2.4 Å
Binding residue
(original residue number in PDB)		A160 H161 R256 N257 E301 W305 M379 R429 W431 R441 Y442 M443 S444 G447 R450
Binding residue
(residue number reindexed from 1)		A163 H164 R226 N227 E271 W275 M349 R399 W401 R411 Y412 M413 S414 G417 R420
Enzymatic activity
Enzyme Commision number 4.1.99.3: deoxyribodipyrimidine photo-lyase.
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003677 DNA binding
GO:0003904 deoxyribodipyrimidine photo-lyase activity
GO:0016829 lyase activity
Biological Process
GO:0000719 photoreactive repair
GO:0006281 DNA repair

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Molecular Function
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Biological Process
External links
PDB RCSB:7yek, PDBe:7yek, PDBj:7yek
PDBsum7yek
PubMed38033054
UniProtQ8PYK9

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