Structure of PDB 7yc7 Chain B Binding Site BS01

Receptor Information
>7yc7 Chain B (length=434) Species: 192952 (Methanosarcina mazei Go1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LVPRGSHMNPKRIRALKSGKQGDGPVVYWMSRDQRAEDNWALLFSRAIAK
EANVPVVVVFCLTDEFLEAGIRQYEFMLKGLQELEVSLSRKKIPSFFLRG
DPGEKISRFVKDYNAGTLVTDFSPLRIKNQWIEKVISGISIPFFEVDAHN
VVPCWEASQKHEYAAHTFRPKLYALLPEFLEEFPELEPNSVTPDPLFEPW
HFEPGEKAAKKVMESFIADRLDSYGALRNDPTKNMLSNLSPYLHFGQISS
QRVVLEVEKAESNPGSKKAFLDEILIWKEISDNFCYYNPGYDGFESFPSW
AKESLNAHRNDVRSHIYTLEEFEAGKTHDPLWNASQMELLSTGKMHGYTR
MYWAKKILEWSESPEKALEIAICLNDRYELDGRDPNGYAGIAWSIGGVHD
RAWGEREVTGKIRYMSYEGCKRKFDVKLYIEKYS
Ligand information
Receptor-Ligand Complex Structure
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PDB7yc7 Visualizing the DNA repair process by a photolyase at atomic resolution
Resolution1.95 Å
Binding residue
(original residue number in PDB)		H161 R256 N257 E301 W305 Y376 M379 W421 R429 W431 R441 Y442 M443 S444 R450 K451
Binding residue
(residue number reindexed from 1)		H166 R228 N229 E273 W277 Y348 M351 W393 R401 W403 R413 Y414 M415 S416 R422 K423
Enzymatic activity
Enzyme Commision number 4.1.99.3: deoxyribodipyrimidine photo-lyase.
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003677 DNA binding
GO:0003904 deoxyribodipyrimidine photo-lyase activity
GO:0016829 lyase activity
Biological Process
GO:0000719 photoreactive repair
GO:0006281 DNA repair

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Molecular Function
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Biological Process
External links
PDB RCSB:7yc7, PDBe:7yc7, PDBj:7yc7
PDBsum7yc7
PubMed38033054
UniProtQ8PYK9

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