Structure of PDB 7y9g Chain B Binding Site BS01
Receptor Information
>7y9g Chain B (length=311) Species:
54571
(Streptomyces venezuelae) [
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PGEFFLPPLPRLLPAGYHPDAARIEIASNGWVRRMLADCFDSEESLLFFL
RQRNGIYGPLTVPYAEADRAQNIADWYQFVTVIDSFVSDASLYGRAAQDL
WRRIAAGMSARQVDRLVAALEAFLRGCAEEIRSKLDKQVPHFEACMRVRV
DSFGCEFLELLTEYAAEVDMSRAATEGLFDEVHHHGMRQLILVNDLLSWR
KEYAQRDTMTTVRVLCEVEGLELQDAVDRLCALVEHHERAYITARDAVLA
GPHGHREDVRAYLSGLDHLIGGSQEFEYLTPRYFGDGSVWDGSTSGWISL
TASVARFRDAP
Ligand information
Ligand ID
POP
InChI
InChI=1S/H4O7P2/c1-8(2,3)7-9(4,5)6/h(H2,1,2,3)(H2,4,5,6)/p-2
InChIKey
XPPKVPWEQAFLFU-UHFFFAOYSA-L
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
O[P@@](=O)([O-])O[P@@](=O)(O)[O-]
CACTVS 3.341
O[P]([O-])(=O)O[P](O)([O-])=O
ACDLabs 10.04
[O-]P(=O)(O)OP([O-])(=O)O
OpenEye OEToolkits 1.5.0
OP(=O)([O-])OP(=O)(O)[O-]
Formula
H2 O7 P2
Name
PYROPHOSPHATE 2-
ChEMBL
DrugBank
ZINC
PDB chain
7y9g Chain B Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
7y9g
Molecular insights into the catalytic promiscuity of a bacterial diterpene synthase.
Resolution
2.18 Å
Binding residue
(original residue number in PDB)
D115 R211 N256 S260 K263 E264 R344 Y345
Binding residue
(residue number reindexed from 1)
D84 R149 N194 S198 K201 E202 R282 Y283
Annotation score
4
External links
PDB
RCSB:7y9g
,
PDBe:7y9g
,
PDBj:7y9g
PDBsum
7y9g
PubMed
37414771
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