Structure of PDB 7xgx Chain B Binding Site BS01
Receptor Information
>7xgx Chain B (length=591) Species:
272624
(Legionella pneumophila subsp. pneumophila str. Philadelphia 1) [
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EQYWRFKLMTEGGCNQNEATRLITVLKRSINKLFENDNFCNRLSSYMAYG
FGAAEEWIKKQQILSNIQPLTPNIFGAAITFGKSPVVKLLKQNAREICES
ILMDEPNLKQVEYIFRLLALQVQETYSGEQAEKLYECIRDKKPIPSKFEE
ILLPIVNRIKENHTEILNESKRNHLGVTIQLNDPYSFSTKNSFCIWFSNN
PNSAMPKKIKDILEERAKQNAPGVTKLVYSRACLTKKENTNFVQWAKENG
ITLLDFDELKCQGEDLELWNLAQAELKAMREGKGGNPAAASDLVRWISGV
IGDVPIAYVDADMPMLTGNKSIKSEEVYAGHPVLLNMGSALVKDGVNLPM
ENVAFNTDIINFTGECKDRSIAIKRIAQSLIGNYLHVTERISKSGNPELK
RLGLMPGYHQLLKDCEENNNKLSLPMLRKALTQAHSNLSSYVRFIGVQRF
AEMVGAPEDAPLFQEALQQGNTIVLTNALVAYLVHGMDNVSRLNSSEKEN
LIKKYLGTQLSLLYKPLVMEFSGPCAVTREILPLLPTGEPTRYIENLKQP
DAQILRVLQTHACVAGKTNFTSDNIPNWITSSEELSWMPSE
Ligand information
Ligand ID
UPG
InChI
InChI=1S/C15H24N2O17P2/c18-3-5-8(20)10(22)12(24)14(32-5)33-36(28,29)34-35(26,27)30-4-6-9(21)11(23)13(31-6)17-2-1-7(19)16-15(17)25/h1-2,5-6,8-14,18,20-24H,3-4H2,(H,26,27)(H,28,29)(H,16,19,25)/t5-,6-,8-,9-,10+,11-,12-,13-,14-/m1/s1
InChIKey
HSCJRCZFDFQWRP-JZMIEXBBSA-N
SMILES
Software
SMILES
CACTVS 3.370
OC[C@H]1O[C@H](O[P](O)(=O)O[P](O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)N3C=CC(=O)NC3=O)[C@H](O)[C@@H](O)[C@@H]1O
ACDLabs 12.01
O=C1C=CN(C(=O)N1)C2OC(C(O)C2O)COP(=O)(OP(=O)(OC3OC(C(O)C(O)C3O)CO)O)O
CACTVS 3.370
OC[CH]1O[CH](O[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)N3C=CC(=O)NC3=O)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.7.6
C1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@](=O)(O)O[P@](=O)(O)O[C@@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O)O)O
OpenEye OEToolkits 1.7.6
C1=CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)OP(=O)(O)OC3C(C(C(C(O3)CO)O)O)O)O)O
Formula
C15 H24 N2 O17 P2
Name
URIDINE-5'-DIPHOSPHATE-GLUCOSE;
URIDINE-5'-MONOPHOSPHATE GLUCOPYRANOSYL-MONOPHOSPHATE ESTER
ChEMBL
CHEMBL375951
DrugBank
DB01861
ZINC
ZINC000008215472
PDB chain
7xgx Chain B Residue 701 [
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Receptor-Ligand Complex Structure
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PDB
7xgx
Structural Basis for the Action Mechanism of Legionella Glycosyltransferase.
Resolution
2.39 Å
Binding residue
(original residue number in PDB)
I223 W224 F225 P315 S319 D320 R323 D338 V546 S625 W626
Binding residue
(residue number reindexed from 1)
I195 W196 F197 P287 S291 D292 R295 D310 V518 S586 W587
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:7xgx
,
PDBe:7xgx
,
PDBj:7xgx
PDBsum
7xgx
PubMed
UniProt
Q5ZRL9
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