Structure of PDB 7x1x Chain B Binding Site BS01
Receptor Information
>7x1x Chain B (length=338) Species:
399795
(Comamonas testosteroni KF-1) [
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GHQLRLGVAGLGRAFTLMLPTLQQDPRIKLVAACDPRGSARAQFASDFRA
PVYPDIEGLASNPDVEAIYIASPHQFHAQQARIAARHGKHVLVEKPMALS
LGDCDEMIQHCRDAGVHLIVGHCHSFDTPYLSAREIVQSGELGPVRMVHA
LNYTDFLYRPGGGVVFSQAAHQVDIVRLLVGTRVRRVRAITGDWDPMRPT
QGAYSALLWFEGGAFASISYNGYGHFDSDEWCDWIGEMGGDKSPQPIWHQ
HFGPIVVSCERGDIRPLPDSVCVYADLAKERRSLQRPVVPRFEVIDELYH
AVVNEIKPLHDGVWARATLEVCLALLDSAGSGKDVELP
Ligand information
Ligand ID
NAD
InChI
InChI=1S/C21H27N7O14P2/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(32)14(30)11(41-21)6-39-44(36,37)42-43(34,35)38-5-10-13(29)15(31)20(40-10)27-3-1-2-9(4-27)18(23)33/h1-4,7-8,10-11,13-16,20-21,29-32H,5-6H2,(H5-,22,23,24,25,33,34,35,36,37)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
BAWFJGJZGIEFAR-NNYOXOHSSA-N
SMILES
Software
SMILES
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@](O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)O)O)O)O)C(=O)N
Formula
C21 H27 N7 O14 P2
Name
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
ChEMBL
CHEMBL1234613
DrugBank
DB14128
ZINC
PDB chain
7x1x Chain B Residue 502 [
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Receptor-Ligand Complex Structure
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PDB
7x1x
Conformational flexibility enables catalysis of phthalate cis-4,5-dihydrodiol dehydrogenase.
Resolution
2.77 Å
Binding residue
(original residue number in PDB)
G13 G15 R16 A17 D38 P39 R40 A74 S75 P76 H77 F79 Q83 E97 K98 R344
Binding residue
(residue number reindexed from 1)
G10 G12 R13 A14 D35 P36 R37 A71 S72 P73 H74 F76 Q80 E94 K95 R291
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000166
nucleotide binding
GO:0003824
catalytic activity
View graph for
Molecular Function
External links
PDB
RCSB:7x1x
,
PDBe:7x1x
,
PDBj:7x1x
PDBsum
7x1x
PubMed
35667443
UniProt
A0A076PYH9
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