Structure of PDB 7vgq Chain B Binding Site BS01

Receptor Information
>7vgq Chain B (length=49) Species: 83333,3052317 [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
YGRYNCKCCWFADTNLITCNDHYLCLRCHQTMLRNSELCHICWKPLPTS
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain7vgq Chain B Residue 101 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7vgq Structure of Machupo virus polymerase in complex with matrix protein Z.
Resolution4.0 Å
Binding residue
(original residue number in PDB)		C42 C61
Binding residue
(residue number reindexed from 1)		C9 C28
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0015144 carbohydrate transmembrane transporter activity
GO:0046872 metal ion binding
GO:1901982 maltose binding
Biological Process
GO:0006974 DNA damage response
GO:0008643 carbohydrate transport
GO:0015768 maltose transport
GO:0034219 carbohydrate transmembrane transport
GO:0034289 detection of maltose stimulus
GO:0039702 viral budding via host ESCRT complex
GO:0042956 maltodextrin transmembrane transport
GO:0046761 viral budding from plasma membrane
GO:0055085 transmembrane transport
GO:0060326 cell chemotaxis
Cellular Component
GO:0016020 membrane
GO:0020002 host cell plasma membrane
GO:0030288 outer membrane-bounded periplasmic space
GO:0030430 host cell cytoplasm
GO:0042597 periplasmic space
GO:0043190 ATP-binding cassette (ABC) transporter complex
GO:0044220 host cell perinuclear region of cytoplasm
GO:0044423 virion component
GO:0055052 ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
GO:1990060 maltose transport complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7vgq, PDBe:7vgq, PDBj:7vgq
PDBsum7vgq
PubMed34697302
UniProtP0AEX9|MALE_ECOLI Maltose/maltodextrin-binding periplasmic protein (Gene Name=malE);
Q6IUF9

[Back to BioLiP]