Structure of PDB 7uww Chain B Binding Site BS01

Receptor Information

>7uww Chain B (length=627) Species: 657321 (Ruminococcus bromii L2-63)

SGSEAYFDNSKYGWKDVYVYAYGTKENAEWPGELMTKEDSGLYKASFASS
FKSEKIIFNNGLEKGNGKEQYPEAAGLSLKAGECKMLTAEKQWIDYGKPD
DHAYGYTLTANNTAFSTESLDVKLALKNADKGYYSVDGSAKKEFANGDSV
KVGEGKIGNSKVTLTLYATGADGVETEQTYTFKKTFTASKTTFSAKSDGH
TTAPESGYYGTNPEMQLGKHKTISVDGDLSDWDSSMIIAQGVANDDPRVY
MPSSMHEQPWDAYALYSAWDDDNLYFLLEMANTTYITSPEDNFAASNEAR
PWRNSIPMYLALSIDPAKQATGKAVGTNKDGSVYTNPFVWGCTDGGTGFT
THIDTLVAFDSNNSNGGASIFKADTQDTDGTYMFNYDTRIPIGVTSFQAQ
DNKNGFKIKYANGTKSTSIFGINAPKGSRVMGDNLDMNSNWVDFFDEGYK
NSYGYVYEIAVPLNTLGIDRSYIETQGIGAMQILTYGTSGMDTLPHDPSM
LDQANLEYSYDPSTSHEKEDIDNITVPLARIGALLPDTEVNEAPFEVNFG
ANLNSGQSAGTPITLLAESYHATGDVTYSFTVNGETVQNSNTDSCVWTPS
ADGTYSIGVVAVDANGNKAESTKTFVV

Ligand information

• Ligand ID: GLC
• InChI: InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6+/m1/s1
• InChIKey: WQZGKKKJIJFFOK-DVKNGEFBSA-N
• SMILES:
  OpenEye OEToolkits 1.5.0: C(C1C(C(C(C(O1)O)O)O)O)O
  OpenEye OEToolkits 1.5.0: C([C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)O)O)O)O
  CACTVS 3.341: OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
  CACTVS 3.341: OC[C@H]1O[C@H](O)[C@H](O)[C@@H](O)[C@@H]1O
  ACDLabs 10.04: OC1C(O)C(OC(O)C1O)CO
• Formula: C6 H12 O6
• Name: alpha-D-glucopyranose;
  alpha-D-glucose;
  D-glucose;
  glucose
• ChEMBL: CHEMBL423707
• ZINC: ZINC000003861213
• PDB chain: 7uww Chain I Residue 1

Receptor-Ligand Complex Structure

Structure summary

• PDB: 7uww The Ruminococcus amylosome protein Sas6 binds single and double helical a-glucans structures in starch
• Resolution: 1.61 Å
• Binding residue (original residue number in PDB): Y53 Y55 I90 A107
• Binding residue (residue number reindexed from 1): Y20 Y22 I57 A74
• Annotation score: 4

Gene Ontology

Molecular Function

• GO:0046872 metal ion binding

Biological Process

• GO:0030245 cellulose catabolic process

External links

• PDB: RCSB:7uww, PDBe:7uww, PDBj:7uww
• PDBsum: 7uww
• PubMed: 38177679
• UniProt: A0A2N0UYM2