Structure of PDB 7uws Chain B Binding Site BS01

Receptor Information
>7uws Chain B (length=400) Species: 11276 (Vesicular stomatitis virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MSVTVKRVIVPKLPANEDPVEYPADYFRKSKEIPLYINTTKSLSDLRGYV
YQGLKSGNVSIIHVNSYLYGALKDIRGKLDKDWSSFGINIGKAGDTIGIF
DLVSLKALDGVLPDGVSDASRTSADDKWLPLYLLGLYRVGRTQMPEYRKK
LMDGLTNQCKMINEQFEPLVPEGRDIFDVWGNDSNYTKIVAAVDMFFHMF
KKHECASFRYGTIVSRFKDCAALATFGHLCKITGMSTEDVTTWILNREVA
DEMVQMMLPGQEIDKADSYMPYLIDFGLSSKSPYSSVKNPAFHFWGQLTA
LLLRSTRARNARQPDDIEYTSLTTAGLLYAYAVGSSADLAQQFCVAPPQG
RDVVEWLGWFEDQNRKPTPDMMQYAKRAVMSLQGLREKTIGKYAKSEFDK
Ligand information
>7uws Chain H (length=68) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuu
uuuuuuuuuuuuuuuuuu
..................................................
..................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7uws Atomic model of vesicular stomatitis virus and mechanism of assembly.
Resolution3.47 Å
Binding residue
(original residue number in PDB)		R143 M149 E151 Y152 K155 Q163 K206 R214 Y215 I218 D224 A226 K286 S290 S291 V292 H298 R312 N315 A316 R317 R408
Binding residue
(residue number reindexed from 1)		R138 M144 E146 Y147 K150 Q158 K201 R209 Y210 I213 D219 A221 K281 S285 S286 V287 H293 R307 N310 A311 R312 R386
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005515 protein binding
Biological Process
GO:0019083 viral transcription
GO:0039703 RNA replication
Cellular Component
GO:0019013 viral nucleocapsid
GO:0019029 helical viral capsid
GO:0030430 host cell cytoplasm
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7uws, PDBe:7uws, PDBj:7uws
PDBsum7uws
PubMed36216930
UniProtP03521|NCAP_VSIVA Nucleoprotein (Gene Name=N)

[Back to BioLiP]