Structure of PDB 7t9v Chain B Binding Site BS01

Receptor Information
>7t9v Chain B (length=181) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
FNVAHGLAWSYYIGYLRLILPELQARIRTYNQHYNNLLRGAVSQRLYILL
PLDCGVPDNLSMADPNIRFLDKLPQQVYSNSIYELLENGQRAGTCVLEYA
TPLQTLFAMSQYSQAGFSREDRLEQAKLFCRTLEDILADAPESQNNCRLI
AYQEPADDSSFSLSQEVLRHLRQEEKEEVTV
Ligand information
Ligand IDGC0
InChIInChI=1S/C36H40N12O6/c1-6-46-25(11-18(3)43-46)33(51)41-35-39-23-13-20(31(37)49)15-27(53-5)29(23)45(35)10-8-9-22-17-54-28-16-21(32(38)50)14-24-30(28)48(22)36(40-24)42-34(52)26-12-19(4)44-47(26)7-2/h11-16,22H,6-10,17H2,1-5H3,(H2,37,49)(H2,38,50)(H,39,41,51)(H,40,42,52)/t22-/m0/s1
InChIKeyNXSXSRGBZKGELX-QFIPXVFZSA-N
SMILES
SoftwareSMILES
CACTVS 3.385CCn1nc(C)cc1C(=O)Nc2nc3cc(cc(OC)c3n2CCC[C@H]4COc5cc(cc6nc(NC(=O)c7cc(C)nn7CC)n4c56)C(N)=O)C(N)=O
ACDLabs 12.01Cc1cc(n(CC)n1)C(=O)Nc1nc2cc(cc(OC)c2n1CCCC1COc2cc(cc3nc(NC(=O)c4cc(C)nn4CC)n1c23)C(N)=O)C(N)=O
OpenEye OEToolkits 2.0.7CCn1c(cc(n1)C)C(=O)Nc2nc3cc(cc(c3n2CCCC4COc5cc(cc6c5n4c(n6)NC(=O)c7cc(nn7CC)C)C(=O)N)OC)C(=O)N
OpenEye OEToolkits 2.0.7CCn1c(cc(n1)C)C(=O)Nc2nc3cc(cc(c3n2CCC[C@H]4COc5cc(cc6c5n4c(n6)NC(=O)c7cc(nn7CC)C)C(=O)N)OC)C(=O)N
CACTVS 3.385CCn1nc(C)cc1C(=O)Nc2nc3cc(cc(OC)c3n2CCC[CH]4COc5cc(cc6nc(NC(=O)c7cc(C)nn7CC)n4c56)C(N)=O)C(N)=O
FormulaC36 H40 N12 O6
Name(3S,4S)-4-(3-{5-carbamoyl-2-[(1-ethyl-3-methyl-1H-pyrazole-5-carbonyl)amino]-7-methoxy-1H-benzimidazol-1-yl}propyl)-2-[(1-ethyl-3-methyl-1H-pyrazole-5-carbonyl)amino]-4,5-dihydroimidazo[1,5,4-de][1,4]benzoxazine-8-carboxamide
ChEMBL
DrugBank
ZINC
PDB chain7t9v Chain A Residue 402 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7t9v SHR1032, a novel STING agonist, stimulates anti-tumor immunity and directly induces AML apoptosis.
Resolution2.68 Å
Binding residue
(original residue number in PDB)
S162 Y167 Y240 S241 T263
Binding residue
(residue number reindexed from 1)
S10 Y15 Y78 S79 T101
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0002218 activation of innate immune response
GO:0032481 positive regulation of type I interferon production

View graph for
Biological Process
External links
PDB RCSB:7t9v, PDBe:7t9v, PDBj:7t9v
PDBsum7t9v
PubMed35595822
UniProtQ86WV6|STING_HUMAN Stimulator of interferon genes protein (Gene Name=STING1)

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