Structure of PDB 7qz6 Chain B Binding Site BS01
Receptor Information
>7qz6 Chain B (length=104) Species:
1359
(Lactococcus cremoris) [
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PKEMLRAQTNVILLNVLKQGDNYVYGIIKQVKEASNGEMELNEATLYTIF
KRLEKDGIISSYWGDGRRKYYRLTEIGHENMRLAFESWSRVDKIIENLEA
NKKS
Ligand information
Ligand ID
DM1
InChI
InChI=1S/C27H29NO10/c1-10-22(30)14(28)7-17(37-10)38-16-9-27(35,11(2)29)8-13-19(16)26(34)21-20(24(13)32)23(31)12-5-4-6-15(36-3)18(12)25(21)33/h4-6,10,14,16-17,22,30,32,34-35H,7-9,28H2,1-3H3/t10-,14-,16-,17-,22+,27-/m0/s1
InChIKey
STQGQHZAVUOBTE-VGBVRHCVSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=C2c1c(O)c5c(c(O)c1C(=O)c3cccc(OC)c23)CC(O)(C(=O)C)CC5OC4OC(C(O)C(N)C4)C
OpenEye OEToolkits 1.5.0
CC1C(C(CC(O1)OC2CC(Cc3c2c(c4c(c3O)C(=O)c5cccc(c5C4=O)OC)O)(C(=O)C)O)N)O
CACTVS 3.341
COc1cccc2C(=O)c3c(O)c4C[C@](O)(C[C@H](O[C@H]5C[C@H](N)[C@H](O)[C@H](C)O5)c4c(O)c3C(=O)c12)C(C)=O
OpenEye OEToolkits 1.5.0
C[C@H]1[C@H]([C@H](C[C@@H](O1)O[C@H]2C[C@@](Cc3c2c(c4c(c3O)C(=O)c5cccc(c5C4=O)OC)O)(C(=O)C)O)N)O
CACTVS 3.341
COc1cccc2C(=O)c3c(O)c4C[C](O)(C[CH](O[CH]5C[CH](N)[CH](O)[CH](C)O5)c4c(O)c3C(=O)c12)C(C)=O
Formula
C27 H29 N O10
Name
DAUNOMYCIN;
DAUNORUBICIN
ChEMBL
CHEMBL178
DrugBank
DB00694
ZINC
ZINC000003917708
PDB chain
7qz6 Chain A Residue 201 [
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Receptor-Ligand Complex Structure
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PDB
7qz6
The Role of Tryptophan in pi Interactions in Proteins: An Experimental Approach.
Resolution
2.15 Å
Binding residue
(original residue number in PDB)
M8 X96 D100
Binding residue
(residue number reindexed from 1)
M4 X88 D92
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:7qz6
,
PDBe:7qz6
,
PDBj:7qz6
PDBsum
7qz6
PubMed
35868012
UniProt
A2RI36
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