Structure of PDB 7o17 Chain B Binding Site BS01

Receptor Information
>7o17 Chain B (length=298) Species: 316 (Stutzerimonas stutzeri) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NAVEIQGVSQRYGSMTVLHDLNLNLGEGEVLGLFGHNGAGKTTSMKLILG
LLSPSEGQVKVLGRAPNDPQVRRQLGYLPENVTFYPQLSGRETLRHFARL
KGAALTQVDELLEQVGLAHAADRRVKTYSKGMRQRLGLAQALLGEPRLLL
LDQPTVGLDPIATQDLYLLIDRLRQRGTSIILCSHVLPGVEAHINRAAIL
AKGCLQAVGSLSQLRAEAGLPVRIRASGISERDSWLQRWTDAGHSARGLS
ESSIEVVAVNGHKLVLLRQLLGEGEPEDIEIHQPSLEDLYRYYMERAG
Ligand information
Ligand IDATP
InChIInChI=1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(26-10)1-25-30(21,22)28-31(23,24)27-29(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKeyZKHQWZAMYRWXGA-KQYNXXCUSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04O=P(O)(O)OP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.5.0c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
FormulaC10 H16 N5 O13 P3
NameADENOSINE-5'-TRIPHOSPHATE
ChEMBLCHEMBL14249
DrugBankDB00171
ZINCZINC000004261765
PDB chain7o17 Chain B Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7o17 Molecular interplay of an assembly machinery for nitrous oxide reductase.
Resolution4.5 Å
Binding residue
(original residue number in PDB)
Y13 V18 N38 G39 A40 G41 K42 T43 T44 E81
Binding residue
(residue number reindexed from 1)
Y12 V17 N37 G38 A39 G40 K41 T42 T43 E80
Annotation score5
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016787 hydrolase activity
GO:0016887 ATP hydrolysis activity
Cellular Component
GO:0005886 plasma membrane

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:7o17, PDBe:7o17, PDBj:7o17
PDBsum7o17
PubMed35896743
UniProtP19844|NOSF_STUST Probable ABC transporter ATP-binding protein NosF (Gene Name=nosF)

[Back to BioLiP]