Structure of PDB 7ney Chain B Binding Site BS01

Receptor Information
>7ney Chain B (length=496) Species: 452589 (Trichoderma atroviride IMI 206040) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PPHLSFRSFVEALRQDNDLVDINEPVDPDLEAAAITRLVCETDDKAPLFN
NVIGAKDGLWRILGAPASLRSSPKERFGRLARHLALPPTASAKDILDKML
SANSIPPIEPVIVPTGPVKENSIEGENIDLEALPAPMVHQSDGGKYIQTY
GMHVIQSPDGCWTNWSIARAMVSGKRTLAGLVISPQHIRKIQDQWRAIGQ
EEIPWALAFGVPPTAIMASSMPIPDGVSEAGYVGAIAGEPIKLVKCDTNN
LYVPANSEIVLEGTLSTTKMAPEGPFGEMHGYVYPGESHPGPVYTVNKIT
YRNNAILPMSACGRLTDETQTMIGTLAAAEIRQLCQDAGLPITDAFAPFV
GQATWVALKVDTKRLRAMKTNGKAFAKRVGDVVFTQKPGFTIHRLILVGD
DIDVYDDKDVMWAFTTRCRPGTDEVFFDDVVGFQLIPYMSHGNAEAIKGG
KVVSDALLTAEYTTGKDWESADFKNSYPKSIQDKVLNSWERLGFKK
Ligand information
Ligand ID4LU
InChIInChI=1S/C22H29N4O9P/c1-10-7-12-16-15(11(10)2)22(3,4)5-6-25(16)17-19(23-21(31)24-20(17)30)26(12)8-13(27)18(29)14(28)9-35-36(32,33)34/h6-7,13-14,18,27-29H,5,8-9H2,1-4H3,(H3-,23,24,30,31,32,33,34)/p+1/t13-,14+,18-/m0/s1
InChIKeyKOUJZPGFPGLHCZ-IYOUNJFTSA-O
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.9.2Cc1cc2c3c(c1C)C(CC=[N+]3C4=C(N2C[C@@H]([C@@H]([C@@H](COP(=O)(O)O)O)O)O)NC(=O)NC4=O)(C)C
CACTVS 3.385Cc1cc2N(C[CH](O)[CH](O)[CH](O)CO[P](O)(O)=O)C3=C(C(=O)NC(=O)N3)[N+]4=CCC(C)(C)c(c1C)c24
OpenEye OEToolkits 1.9.2Cc1cc2c3c(c1C)C(CC=[N+]3C4=C(N2CC(C(C(COP(=O)(O)O)O)O)O)NC(=O)NC4=O)(C)C
CACTVS 3.385Cc1cc2N(C[C@H](O)[C@H](O)[C@H](O)CO[P](O)(O)=O)C3=C(C(=O)NC(=O)N3)[N+]4=CCC(C)(C)c(c1C)c24
ACDLabs 12.01c1c3c4c(c(c1C)C)C(C)(CC=[N+]4C2=C(NC(NC2=O)=O)N3CC(C(C(O)COP(O)(O)=O)O)O)C
FormulaC22 H30 N4 O9 P
Name1-deoxy-5-O-phosphono-1-(3,3,4,5-tetramethyl-9,11-dioxo-2,3,8,9,10,11-hexahydro-7H-quinolino[1,8-fg]pteridin-12-ium-7-y l)-D-ribitol;
prenylated-FMN iminium form
ChEMBL
DrugBank
ZINCZINC000263614449
PDB chain7ney Chain B Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB7ney Directed evolution of prenylated FMN-dependent Fdc supports efficient in vivo isobutene production.
Resolution1.74 Å
Binding residue
(original residue number in PDB)
T163 N178 S180 I181 R183 Q200 H201 S233 S234 M235 P236 I337 K401
Binding residue
(residue number reindexed from 1)
T149 N164 S166 I167 R169 Q186 H187 S219 S220 M221 P222 I323 K387
Annotation score1
Enzymatic activity
Enzyme Commision number 4.1.1.102: phenacrylate decarboxylase.
Gene Ontology
Molecular Function
GO:0016831 carboxy-lyase activity
GO:0046872 metal ion binding
Biological Process
GO:0033494 ferulate metabolic process
GO:0046281 cinnamic acid catabolic process
Cellular Component
GO:0005737 cytoplasm

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:7ney, PDBe:7ney, PDBj:7ney
PDBsum7ney
PubMed34489427
UniProtG9NLP8

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