Structure of PDB 7mhb Chain B Binding Site BS01
Receptor Information
>7mhb Chain B (length=305) Species:
359391
(Brucella abortus 2308) [
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NFSPREIVSELDRFIIGQKDAKRAVAIALRNRWRRQQLEGQMREEVMPKN
ILMIGPTGVGKTEISRRLAKLAGAPFVKVEATKFTEVGYVGRDVEQIIRD
LVEIAITLVREKRREDQIVQEALRVSEDEGIVFIDEIDKIAARESGAGVS
REGVQRDLLPLVEGTTVATKYGPVKTDHILFITSGAFHVSKPSDLLPELQ
GRLPIRVELSALTREDFRRILTETEASLIKQYIALMETEEVKLEFSDDAI
DALADIAVDLNATVENIGARRLQTVIEKVLDEISFTAPDKAGATFIIDAA
YVKEG
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
7mhb Chain B Residue 501 [
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Receptor-Ligand Complex Structure
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PDB
7mhb
Crystal structure of ATP-dependent protease ATPase subunit HslU in complex with Adenosine 5'-diphosphate
Resolution
2.6 Å
Binding residue
(original residue number in PDB)
I17 I18 G60 V61 G62 K63 T64 E65 I334 A383 R384
Binding residue
(residue number reindexed from 1)
I15 I16 G58 V59 G60 K61 T62 E63 I220 A269 R270
Annotation score
5
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005524
ATP binding
GO:0008233
peptidase activity
GO:0016887
ATP hydrolysis activity
GO:0036402
proteasome-activating activity
Biological Process
GO:0043335
protein unfolding
GO:0051603
proteolysis involved in protein catabolic process
GO:1901800
positive regulation of proteasomal protein catabolic process
Cellular Component
GO:0005737
cytoplasm
GO:0009376
HslUV protease complex
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:7mhb
,
PDBe:7mhb
,
PDBj:7mhb
PDBsum
7mhb
PubMed
UniProt
Q2YQZ4
|HSLU_BRUA2 ATP-dependent protease ATPase subunit HslU (Gene Name=hslU)
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