Structure of PDB 7m7a Chain B Binding Site BS01
Receptor Information
>7m7a Chain B (length=522) Species:
446
(Legionella pneumophila) [
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GLPKKALKESQLQFTYKVSFIENGVIKNAFYKKLYPELLAKISVAVSLFK
RIFQGRRSAEERLVFDDEERLVGTLSISVDGFKGFNFHKESVPQESSAKE
QVIPSTRTLIEKSFMEILLGRWFLDDDDGHPHNLSLAGDIDFDMFFYWFT
IYMVNLTVRDWEGFPNVKDSKPFHWPTYKNPGQYPDPGQFEQLAHEPVAQ
EQKFAAALKILLTYQPEMIRKRLTELFGEMTLNYTSLDETDVALRNQYEK
TFPHLCNENTNIKPFVDFIMNLYQMHYDNLYRVVVFYMGCENNGYGVPLP
ATNSALYHKPSFYKDIVEWARTQNITIFSKDDSSIKFDEDELRRRYHQVW
RDAYAPTFRDLLHDSYSLTNKLLQQVHVVLDEVEGKKPTDDTLTNAWELF
GTMPELSLEKITPLISVDKDSKLRTALILLVEFTTQFHAVAKTYYQKDRK
DLTEEDNLEFSEQLVQLYTNYNLKIRQSLAHTSTLAGEFNRIAVGLKQYT
ERANFQLHLTTTDEQMKEATVA
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
7m7a Chain B Residue 701 [
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Receptor-Ligand Complex Structure
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PDB
7m7a
Dynamic remodeling of host membranes by self-organizing bacterial effectors.
Resolution
3.2 Å
Binding residue
(original residue number in PDB)
F44 K46 S95 I96 S97 N152 I159 D160
Binding residue
(residue number reindexed from 1)
F30 K32 S76 I77 S78 N133 I140 D141
Annotation score
1
Enzymatic activity
Enzyme Commision number
3.1.3.64
: phosphatidylinositol-3-phosphatase.
External links
PDB
RCSB:7m7a
,
PDBe:7m7a
,
PDBj:7m7a
PDBsum
7m7a
PubMed
33927055
UniProt
Q5ZRA8
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