Structure of PDB 7lr6 Chain B Binding Site BS01

Receptor Information
>7lr6 Chain B (length=424) Species: 548480 (Bifidobacterium longum subsp. longum ATCC 55813) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HMKFGVNYTPSHGWFHAWLDPDWDGIDNDLKQISELGMDHVRIFPIWPYL
QPNRTWINKKGVADVRRMVHIAGEHGLDAYVDVFQGHLSSFDFLPSWLVT
WHAGNMFTDADAVAAERELVKTMTDELSKEPAFKGLTLGNAVNQLSDRPH
PTKMSATDRQIDAWLDALLPTAAGEGHNALYSVNDGTWFIDGHPFTPVQS
ATKGDMTVIHSWVFNGIAQGYGATSEECSSYALYLAELAKAFGKDSERPV
WLQEVGAPENVLETDYTPEFCRKTVERAMDCRNLWGVTWWCSHDVPASME
DFPFFEHSLGLFDEQGQLKPIGRTFGELAAQYRSALPAQPKTVAVVIDVD
EAGNPVNRSALGPGGSVCDLWMKLQVAGQRPTIITSQVAANQEALAQRGI
LELHADEHPYAARYYTAVSDPSFE
Ligand information
Ligand IDBMA
InChIInChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5+,6-/m1/s1
InChIKeyWQZGKKKJIJFFOK-RWOPYEJCSA-N
SMILES
SoftwareSMILES
CACTVS 3.341OC[C@H]1O[C@@H](O)[C@@H](O)[C@@H](O)[C@@H]1O
OpenEye OEToolkits 1.5.0C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.341OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.5.0C([C@@H]1[C@H]([C@@H]([C@@H]([C@@H](O1)O)O)O)O)O
ACDLabs 10.04OC1C(O)C(OC(O)C1O)CO
FormulaC6 H12 O6
Namebeta-D-mannopyranose;
beta-D-mannose;
D-mannose;
mannose
ChEMBL
DrugBank
ZINCZINC000003830679
PDB chain7lr6 Chain G Residue 2 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7lr6 N-Glycan Degradation Pathways in Gut- and Soil-Dwelling Actinobacteria Share Common Core Genes.
Resolution2.3 Å
Binding residue
(original residue number in PDB)		S88 N139 W211 F213 E253 W289 F304 E305
Binding residue
(residue number reindexed from 1)		S89 N140 W212 F214 E254 W290 F305 E306
Annotation score4
External links