Structure of PDB 7kg5 Chain B Binding Site BS01
Receptor Information
>7kg5 Chain B (length=296) Species:
192222
(Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819) [
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KNIIIGAMTALITPFKNGKVDEQSYARLIKRQIENGIDAVVPVGTTGESA
TLTWEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGAD
GILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTI
IKLFRDCENIYGVKEASGNIDKCVDLLAHEPRMMLISGEDAINYPILSNG
GKGVISVTSNLLPDMISALTHFALDENYKEAKKINDELYNINKILFCESN
PIPIKTAMYLAGLIESLEFRLPLCSPSKENFAKIEEVMKKYKIKGF
Ligand information
Ligand ID
MG
InChI
InChI=1S/Mg/q+2
InChIKey
JLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341
[Mg++]
Formula
Mg
Name
MAGNESIUM ION
ChEMBL
DrugBank
DB01378
ZINC
PDB chain
7kg5 Chain B Residue 305 [
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Receptor-Ligand Complex Structure
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PDB
7kg5
Fluorescence-based Assay Development for Screening Novel Inhibitors of Dihydrodipicolinate Synthase from Campylobacter jejuni
Resolution
1.95 Å
Binding residue
(original residue number in PDB)
S251 N252
Binding residue
(residue number reindexed from 1)
S249 N250
Annotation score
1
Enzymatic activity
Enzyme Commision number
4.3.3.7
: 4-hydroxy-tetrahydrodipicolinate synthase.
Gene Ontology
Molecular Function
GO:0008840
4-hydroxy-tetrahydrodipicolinate synthase activity
GO:0016829
lyase activity
Biological Process
GO:0009085
lysine biosynthetic process
GO:0009089
lysine biosynthetic process via diaminopimelate
GO:0019877
diaminopimelate biosynthetic process
GO:0044281
small molecule metabolic process
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:7kg5
,
PDBe:7kg5
,
PDBj:7kg5
PDBsum
7kg5
PubMed
UniProt
Q9PPB4
|DAPA_CAMJE 4-hydroxy-tetrahydrodipicolinate synthase (Gene Name=dapA)
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