Structure of PDB 7k4d Chain B Binding Site BS01

Receptor Information
>7k4d Chain B (length=612) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SWAQSRDEQNLLQQKRIWESPLLLAAKDNDVQALNKLLKYEDCKVHQRGA
MGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVVN
QNMNLVRALLARRASVSARATGTAFRRSPCNLIYFGEHPLSFAACVNSEE
IVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDRHGD
HLQPLDLVPNHQGLTPFKLAGVEGNTVMFQHLMQKRKHTQWTYGPLTSTL
YDLTEIDSSGDEQSLLELIITTKKREARQILDQTPVKELVSLKWKRYGRP
YFCMLGAIYLLYIICFTMCCIYRPLKPRTNNRTSPRDNTLLQQKLLQEAY
MTPKDDIRLVGELVTVIGAIIILLVEVPDIFRMGVTRFFGQTILGGPFHV
LIITYAFMVLVTMVMRLISASGEVVPMSFALVLGWCNVMYFARGFQMLGP
FTIMIQKMIFGDLMRFCWLMAVVILGFASAFYIIFQTEDPEELGHFYDYP
MALFSTFELFLTIIDGPANYNVDLPFMYSITYAAFAIIATLLMLNLLIAM
MGDTHWRVAHERDELWRAQIVATTVMLERKLPRCLWPRSGICGREYGLGD
RWFLRVEDRQDL
Ligand information
Ligand IDVUM
InChIInChI=1S/C23H28F3N3O2/c24-23(25,26)19-3-1-2-18(14-19)22(31)8-6-20(7-9-22)29-12-10-28(11-13-29)16-17-4-5-21(30)27-15-17/h1-5,14-15,20,31H,6-13,16H2,(H,27,30)/t20-,22-
InChIKeyHGNRFWCPFKHVCH-AQYVVDRMSA-N
SMILES
SoftwareSMILES
CACTVS 3.385O[C]1(CC[CH](CC1)N2CCN(CC2)CC3=CNC(=O)C=C3)c4cccc(c4)C(F)(F)F
OpenEye OEToolkits 2.0.7c1cc(cc(c1)C(F)(F)F)C2(CCC(CC2)N3CCN(CC3)CC4=CNC(=O)C=C4)O
ACDLabs 12.01C1(C=CC(=CN1)CN2CCN(CC2)C4CCC(O)(c3cc(ccc3)C(F)(F)F)CC4)=O
CACTVS 3.385O[C@]1(CC[C@@H](CC1)N2CCN(CC2)CC3=CNC(=O)C=C3)c4cccc(c4)C(F)(F)F
FormulaC23 H28 F3 N3 O2
Name5-[(4-{trans-4-hydroxy-4-[3-(trifluoromethyl)phenyl]cyclohexyl}piperazin-1-yl)methyl]pyridin-2(1H)-one
ChEMBLCHEMBL4777551
DrugBank
ZINC
PDB chain7k4d Chain B Residue 701 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7k4d Inactivation-mimicking block of the epithelial calcium channel TRPV6.
Resolution3.66 Å
Binding residue
(original residue number in PDB)
F425 F456 C463 I482 Q483
Binding residue
(residue number reindexed from 1)
F398 F429 C436 I455 Q456
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005216 monoatomic ion channel activity
GO:0005262 calcium channel activity
Biological Process
GO:0006811 monoatomic ion transport
GO:0006816 calcium ion transport
GO:0055085 transmembrane transport
Cellular Component
GO:0016020 membrane

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:7k4d, PDBe:7k4d, PDBj:7k4d
PDBsum7k4d
PubMed33246965
UniProtQ9H1D0|TRPV6_HUMAN Transient receptor potential cation channel subfamily V member 6 (Gene Name=TRPV6)

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