Structure of PDB 7h6m Chain B Binding Site BS01
Receptor Information
>7h6m Chain B (length=163) Species:
37124
(Chikungunya virus) [
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GAMAPSYRVKRMDIAKNDEECVVNAANPRGLPGDGVCKAVYKKWPESFKN
SATPVGTAKTVMCGTYPVIHAVGPNFSNYTESEGDRELAAAYREVAKEVT
RLGVNSVAIPLLSTGVYSGGKDRLTQSLNHLFTAMDSTDADVVIYCRDKE
WEKKISEAIQMRT
Ligand information
Ligand ID
YXK
InChI
InChI=1S/C7H6F3N3/c8-7(9,10)5-13-4-3-12-6(13)1-2-11/h3-4H,1,5H2
InChIKey
WWHCIFNAXSSZJE-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 12.01
CACTVS 3.385
FC(F)(F)Cn1ccnc1CC#N
OpenEye OEToolkits 2.0.7
c1cn(c(n1)CC#N)CC(F)(F)F
Formula
C7 H6 F3 N3
Name
[1-(2,2,2-trifluoroethyl)-1H-imidazol-2-yl]acetonitrile
ChEMBL
DrugBank
ZINC
ZINC000057218564
PDB chain
7h6m Chain B Residue 205 [
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Receptor-Ligand Complex Structure
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PDB
7h6m
Group deposition for crystallographic fragment screening of Chikungunya virus nsP3 macrodomain
Resolution
1.39 Å
Binding residue
(original residue number in PDB)
D145 W148
Binding residue
(residue number reindexed from 1)
D148 W151
Annotation score
1
Enzymatic activity
Enzyme Commision number
2.1.1.-
2.7.7.-
2.7.7.19
: polynucleotide adenylyltransferase.
2.7.7.48
: RNA-directed RNA polymerase.
3.1.3.84
: ADP-ribose 1''-phosphate phosphatase.
3.4.22.-
3.6.1.15
: nucleoside-triphosphate phosphatase.
3.6.1.74
: mRNA 5'-phosphatase.
3.6.4.13
: RNA helicase.
External links
PDB
RCSB:7h6m
,
PDBe:7h6m
,
PDBj:7h6m
PDBsum
7h6m
PubMed
UniProt
Q8JUX6
|POLN_CHIKS Polyprotein P1234
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