Structure of PDB 7ezz Chain B Binding Site BS01
Receptor Information
>7ezz Chain B (length=256) Species:
90370
(Salmonella enterica subsp. enterica serovar Typhi) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
AVRGSIIANMLQEHNPFTLYPYDTNYLIYTNTSDLNKEAISTYNWSENAR
KDEVKFQLSLAFPLWRGILGPNSVLGASYTQKSWWQLSNSKESSPFRETN
YEPQLFLGFATDYRFAGWTLRDVEMGYNHDSNGRSDPTSRSWNRLYTRLM
AENGNWLVEVKPWYVIGSTDDNPDITKYMGYYQLKIGYHLGEAVLSAKGQ
YNWNTGYGGAEVGLSYPVTKHVRLYTQVYSGYGESLIDYNFNQTRVGVGV
MLNDIF
Ligand information
Ligand ID
CA
InChI
InChI=1S/Ca/q+2
InChIKey
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
Formula
Ca
Name
CALCIUM ION
ChEMBL
DrugBank
DB14577
ZINC
PDB chain
7ezz Chain B Residue 302 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
7ezz
Crystal structure of Salmonella typhi outer membrane phospholipase (OMPLA) dimer with bound calcium
Resolution
2.76 Å
Binding residue
(original residue number in PDB)
R167 S172
Binding residue
(residue number reindexed from 1)
R134 S139
Annotation score
1
Enzymatic activity
Enzyme Commision number
3.1.1.32
: phospholipase A1.
3.1.1.4
: phospholipase A2.
Gene Ontology
Molecular Function
GO:0004620
phospholipase activity
GO:0004623
phospholipase A2 activity
GO:0005509
calcium ion binding
GO:0008970
phospholipase A1 activity
GO:0016787
hydrolase activity
GO:0046872
metal ion binding
GO:0052739
phosphatidylserine 1-acylhydrolase activity
Biological Process
GO:0006629
lipid metabolic process
GO:0016042
lipid catabolic process
Cellular Component
GO:0009279
cell outer membrane
GO:0016020
membrane
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:7ezz
,
PDBe:7ezz
,
PDBj:7ezz
PDBsum
7ezz
PubMed
UniProt
P0A232
|PA1_SALTI Phospholipase A1 (Gene Name=pldA)
[
Back to BioLiP
]