Structure of PDB 7d6a Chain B Binding Site BS01

Receptor Information

>7d6a Chain B (length=477) Species: 39947 (Oryza sativa Japonica Group) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

AMAIHRSDFPASFLFGTATSSYQIEGAYLEGNKSLSNWDVFTHLPGNIKD
GSNGDIADDHYHRYEEDVELMNSLGVNAYRFSISWSRILPKGRFGGVNPA
GIDFYNKLIDSILLKGIQPFVTLTHYDIPQELEDRYGAWLNAEIQSDFGH
FADVCFGAFGDRVKYWTTFNEPNVAVRHGYMLGTYPPSRCSPPFGHCARG
GDSHAEPYVAAHNVILSHATAIEIYKRKYQSKQRGMIGMVLYSTWYEPLR
DVPEDRLATERALAFETPWFLDPLVYGDYPPEMRQILGGRLPSFSPEDRR
KLRYKLDFIGVNHYTTLYARDCMFSDCPQGQETQHALAAVTGESNGLPIG
TPTAMPTFYVVPDGIEKMVKYFMRRYNNLPMFITENGYAQGGDSYTDAED
WIDDEDRIEYLEGYLTKLAKVIRDGADVRGYFAWSVVDNFEWLFGYTLRF
GLYYIDYRTQERSPKLSALWYKEFLQN

Ligand information

Ligand ID

InChI

InChI=1S/Zn/q+2

InChIKey

PTFCDOFLOPIGGS-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Zn++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Zn+2]

Formula

Name

ZINC ION

PDB chain

7d6a Chain B Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	7d6a Structural analysis of rice Os4BGlu18 monolignol beta-glucosidase.
Resolution	1.7 Å
Binding residue (original residue number in PDB)	D82 H85
Binding residue (residue number reindexed from 1)	D59 H62
Annotation score	4

Enzymatic activity

Enzyme Commision number

3.2.1.21: beta-glucosidase.

Gene Ontology

	Molecular Function
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

	Biological Process
GO:0005975	carbohydrate metabolic process

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Molecular Function

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Biological Process

External links

PDB	RCSB:7d6a, PDBe:7d6a, PDBj:7d6a
PDBsum	7d6a
PubMed	33471829
UniProt	Q7XSK0\|BGL18_ORYSJ Beta-glucosidase 18 (Gene Name=BGLU18)

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