Structure of PDB 7ctv Chain B Binding Site BS01

Receptor Information
>7ctv Chain B (length=293) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MSIFSPLIKKAEDLAFLENEEALASLEIIGRGEVFKAELPGKIIAVKKVI
NKKMRQIRSEINTVGHIRHRNLLPLLAHVSRPECHYLVYEYMEKGSLQDI
LTDVQAGNQELMWPARHKIALGIAAGLEYLHMDHNPRIIHRALKPANVLL
DDDMEARISDFGLAKAMPDAVTHITTSHVAGTVGYIAPEFYQTHKFTDKC
DIYSFGVILGILVIGKLPSDEFFQHTDEMSLIKWMRNIITSENPSLAIDP
KLMDQGFDEQMLLVLKIACYCTLDDPKQRPNSKDVRTMLSQIK
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain7ctv Chain B Residue 701 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7ctv Crystal structure of Arabidopsis thaliana SOBIR1 kinase domain D489A mutant in complex with AMP-PNP and magnesium
Resolution2.88561 Å
Binding residue
(original residue number in PDB)
A493 N494 D507
Binding residue
(residue number reindexed from 1)
A146 N147 D160
Annotation score1
Enzymatic activity
Enzyme Commision number 2.7.10.1: receptor protein-tyrosine kinase.
2.7.11.1: non-specific serine/threonine protein kinase.
Gene Ontology
Molecular Function
GO:0004672 protein kinase activity
GO:0005524 ATP binding
Biological Process
GO:0006468 protein phosphorylation

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:7ctv, PDBe:7ctv, PDBj:7ctv
PDBsum7ctv
PubMed
UniProtQ9SKB2|SBIR1_ARATH Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 (Gene Name=SOBIR1)

[Back to BioLiP]