Structure of PDB 7cj7 Chain B Binding Site BS01

Receptor Information
>7cj7 Chain B (length=286) Species: 1727196 (Methylomonas sp. DH-1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AFPKRLEYGGHALVWSGDWSAAGARKAIAGAARAGYDYIEIALLDPWQID
VALTKDLLQEYNLRAHASLGLSAATDVTSTDPAIVAKGDELLRKATDVLY
ALGGSELCGVIYCALGKYPGPASRENRANSVAAMQRLADYAADKGINIDL
EVVNRYETNIMNTGLEGLAFLDEVNRPNAFLHLDTYHMNIEENGMAKSVL
AAGDRLGYVHIGESHRGYLGTGNVDFASFFAALKQIDYRGPITFESFSSE
IVDPKLSNTLCVWRNLWHDSDDLAGKALEFIKQRYG
Ligand information
Ligand IDFZU
InChIInChI=1S/C6H12O6/c7-2-6(11)5(10)4(9)3(8)1-12-6/h3-5,7-11H,1-2H2/t3-,4+,5+,6+/m0/s1
InChIKeyLKDRXBCSQODPBY-SLPGGIOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.385OC[C]1(O)OC[CH](O)[CH](O)[CH]1O
CACTVS 3.385OC[C@@]1(O)OC[C@H](O)[C@@H](O)[C@H]1O
OpenEye OEToolkits 2.0.7C1[C@@H]([C@H]([C@H]([C@](O1)(CO)O)O)O)O
OpenEye OEToolkits 2.0.7C1C(C(C(C(O1)(CO)O)O)O)O
FormulaC6 H12 O6
Name(2R,3R,4R,5S)-2-(hydroxymethyl)oxane-2,3,4,5-tetrol
ChEMBL
DrugBank
ZINCZINC000000895384
PDB chain7cj7 Chain B Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7cj7 Crystal structure of a novel homodimeric l-ribulose 3-epimerase from Methylomonus sp.
Resolution1.695 Å
Binding residue
(original residue number in PDB)		R128 N160 I161 E167
Binding residue
(residue number reindexed from 1)		R127 N159 I160 E166
Annotation score1
Enzymatic activity
Enzyme Commision number 5.1.3.31: D-tagatose 3-epimerase.
Gene Ontology
Molecular Function
GO:0016853 isomerase activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:7cj7, PDBe:7cj7, PDBj:7cj7
PDBsum7cj7
PubMed33838083
UniProtA0A172U6X0|LR3E_METSD L-ribulose 3-epimerase (Gene Name=AYM39_05640)

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