Structure of PDB 7c0u Chain B Binding Site BS01

Receptor Information
>7c0u Chain B (length=397) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MMKPEDVIKEQCARAKVVAELWHGFTGGAPKAALENLVVEFNKAQQGRCV
RPVPQGGYRDLSTKIKAAFAAGKVPTMAQAFENNIALYLEAKALLPIESL
GVKLQGVNLTFLNAVRFGGVVYGVPFNKAIQVLYYNKDLLKKHGVPVPAT
LEEFVAAAKKLSRAEGGPVYWFQPDASTFAYFFFNLGGSYLKDGKLVLNS
KEAVEALTLLQNGVKEGWAKPITSGYINQNLGSGPYAFSVDTSAGYTYYL
RAAKFDLGVATLPGRTKGQPGYGLVQGTNLVVFRQASKEEQAVAKDFLEF
VLSPRAQAVFATATGYVPVTEGALKDPVYQAYAAENPDYATIVRQSRYAK
FEPALAEWEQIRFDILGQAIKEAILNKADPKAALDRAQKLAEDLLSS
Ligand information
Ligand IDFGO
InChIInChI=1S/C22H28N7O13P/c23-20-26-16-13(17(33)27-20)24-7-29(16)18-9-4-22(35,36)3-8(9)11(41-18)6-39-43(37,38)42-15-10(5-30)40-19(14(15)32)28-2-1-12(31)25-21(28)34/h1-2,7-11,14-15,18-19,30,32,35-36H,3-6H2,(H,37,38)(H,25,31,34)(H3,23,26,27,33)/t8-,9+,10+,11+,14+,15+,18+,19+/m0/s1
InChIKeyUMWHQRFZYGKEGD-MIHJLMQYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7c1nc2c(n1C3C4CC(CC4C(O3)COP(=O)(O)OC5C(OC(C5O)N6C=CC(=O)NC6=O)CO)(O)O)N=C(NC2=O)N
OpenEye OEToolkits 2.0.7c1nc2c(n1[C@H]3[C@@H]4CC(C[C@@H]4[C@H](O3)COP(=O)(O)O[C@@H]5[C@H](O[C@H]([C@@H]5O)N6C=CC(=O)NC6=O)CO)(O)O)N=C(NC2=O)N
CACTVS 3.385NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO[P](O)(=O)O[CH]4[CH](O)[CH](O[CH]4CO)N5C=CC(=O)NC5=O)[CH]6CC(O)(O)C[CH]36
CACTVS 3.385NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO[P](O)(=O)O[C@H]4[C@@H](O)[C@@H](O[C@@H]4CO)N5C=CC(=O)NC5=O)[C@H]6CC(O)(O)C[C@@H]36
FormulaC22 H28 N7 O13 P
Name[(1S,3R,3aR,6aS)-3-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-5,5-bis(oxidanyl)-1,3,3a,4,6,6a-hexahydrocyclopenta[c]furan-1-yl]methyl [(2R,3S,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-2-(hydroxymethyl)-4-oxidanyl-oxolan-3-yl] hydrogen phosphate
ChEMBL
DrugBank
ZINC
PDB chain7c0u Chain B Residue 506 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB7c0u Structural and thermodynamic insights into the novel dinucleotide-binding protein of ABC transporter unveils its moonlighting function.
Resolution1.8 Å
Binding residue
(original residue number in PDB)
Y56 R57 F79 N81 Y224 N226 T240 A242 Y246 Q274 G275 Y314 E357 R360 F361
Binding residue
(residue number reindexed from 1)
Y58 R59 F81 N83 Y226 N228 T242 A244 Y248 Q276 G277 Y316 E359 R362 F363
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:1901982 maltose binding
Biological Process
GO:0015768 maltose transport
GO:0042956 maltodextrin transmembrane transport
GO:0055085 transmembrane transport
Cellular Component
GO:0055052 ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:7c0u, PDBe:7c0u, PDBj:7c0u
PDBsum7c0u
PubMed33599038
UniProtQ5SLB4

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