Structure of PDB 7bmf Chain B Binding Site BS01

Receptor Information
>7bmf Chain B (length=444) Species: 187420 (Methanothermobacter thermautotrophicus str. Delta H) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KLPDSILKRGAEASKVLEEHLERGNIIRIISHNDADGLSAAGVVARAISS
MNGQFHISILSRLKKEFIKKLSGEKYSLFFFCDMGSAYLEEISRLKGDVI
VADHHQPSESEAGPHVVHINPHLHGLDGSRDLSASGTAYLATRLLNRKTA
PLALVGALGDMQYTDGFTGANRFIMEEAVEEGVLQVHSDLKLASRYTEPL
YRSIAYTFNPALPGLTGDMEASMGFLENIGVSYGVKYPDLSPEERDVLRD
ELTRINPEIFGEVFTSREFRNIGDLSDIAGVLDACGKNRKYGIGIGLCLG
EREGALDVALELQKNYREELVKGLAWIRREGSTTLENLQYIYSEDKAFKG
IMGTIASISLSLKILDPDIPLLGLSRMDQHVKVSARTTRPAVERGVNLGV
ALRDAAASFGGTGGGHDIAAGAMVPYRDMESFLQLVDEILGTQT
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain7bmf Chain B Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7bmf Crystal structure of RecJCdc45 from Methanothermobacter thermoautotroficus
Resolution2.2 Å
Binding residue
(original residue number in PDB)		D47 D94 H115 D171
Binding residue
(residue number reindexed from 1)		D36 D83 H104 D160
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0004527 exonuclease activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:7bmf, PDBe:7bmf, PDBj:7bmf
PDBsum7bmf
PubMed
UniProtO27473

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