Structure of PDB 7bdu Chain B Binding Site BS01

Receptor Information
>7bdu Chain B (length=371) Species: 9615 (Canis lupus familiaris) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MLSPKAATLAERSAGLAFSLYQAMAKDQAVENILLSPVVVASSLGLVSLG
GKATTASQAKAVLSAEQLRDEEVHAGLGELLRSLSNSTWKLGSRLYGPSS
VSFAEDFVRSSKQHYNCEHSKINFRDKRSALQSINEWAAQTTDGKLPEVT
KDVERTDGALLVNAMFFKPHWDEKFHHKMVDNRGFMVTRSYTVGVTMMHR
TGLYNYYDDEKEKLQIVEMPLAHKLSSLIILMPHHVEPLERLEKLLTKEQ
LKIWMGKMQKKAVAISLPKGVVEVTHDLQKHLAGLGLTEAIDKNKADLSR
MSGKKDLYLASVFHATAFEWDTEGNPFDQDIYGREELRSPKLFYADHPFI
FLVRDTQSGSLLFIGRLVRPK
Ligand information
>7bdu Chain F (length=21) Species: 9606 (Homo sapiens) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
PPGPPGPPGPRGLPGPPGPPG
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7bdu Collagen's primary structure determines collagen:HSP47 complex stoichiometry.
Resolution2.49 Å
Binding residue
(original residue number in PDB)
M218 R222 H238 Y383 D385
Binding residue
(residue number reindexed from 1)
M179 R183 H199 Y344 D346
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004867 serine-type endopeptidase inhibitor activity
GO:0005518 collagen binding
Cellular Component
GO:0005576 extracellular region
GO:0005615 extracellular space
GO:0005783 endoplasmic reticulum

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:7bdu, PDBe:7bdu, PDBj:7bdu
PDBsum7bdu
PubMed34487762
UniProtA0A8I3N7V2

[Back to BioLiP]