Structure of PDB 6znq Chain B Binding Site BS01

Receptor Information
>6znq Chain B (length=711) Species: 224308 (Bacillus subtilis subsp. subtilis str. 168) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KSLTELISDLKGNENVVNWHEIEPREAKTRPMPESIDERIKAALSKRGID
ELYTHQYSAFQYVQKGESIVTVTPTASGKTLCYNLPVLQSIAQDETNRAL
YLFPTKALAQDQKSELNEIIDEMGIDIKSFTYDGDTSPAIRQKVRKAGHI
VITNPDMLHSAILPHHTKWVSLFENLKYIVIDELHTYRGVFGSHVANVIR
RLKRICRFYGSDPVFICTSATIANPKELGEQLTGKPMRLVDDNGAPSGRK
HFVFYNPPIVNKIRRSATAEVNELAKEFLKNKVQTIVFARSRVRVEIILS
HIQELVKKEIGTKSIRGYRGGYLPKERREIERGLREGDILGVVSTNALEL
GVDIGQLQVCVMTGYPGSVASAWQQAGRAGRRHGESLIIMVANSTPIDQY
IVRHPEYFFNRSPESARINPENLIILVDHLKCAAYELPFRADEEFGAMEV
SDILEYLQEEAVLHRNGERYHWASESFPASNISLRSASQENVVIVDQSDI
ANVRIIGEMDRFSAMTLLHDEAIYLHEGVQYQVEKLDWDHKKAYVRKVDV
EYYTDANLAVQLKIDKTDVTVNALPTIFKKIKMTTFENIGSGPIHLPEEE
LHTSAAWLETLEQLLLGISNVLQHIVPVYIMCDRNDVHVVSQIKAAHTGL
PTIFLYDHYPGGIGLAEEVFKRFSDINEAAKQLITHCPCHDGCPSCIGTK
AKERILQLLDQ
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6znq A skipping rope translocation mechanism in a widespread family of DNA repair helicases.
Resolution3.34 Å
Binding residue
(original residue number in PDB)		T108 K109 Y135 G137 R144 N157 D159 M160 S163 A164 H168 K171 S297 R298 R325 G326 R333 T351 N352 A353 F483 S489 R491 N666
Binding residue
(residue number reindexed from 1)		T105 K106 Y132 G134 R141 N154 D156 M157 S160 A161 H165 K168 S291 R292 R319 G320 R327 T345 N346 A347 F477 S483 R485 N635
Enzymatic activity
Enzyme Commision number 3.6.4.-
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0004386 helicase activity
GO:0005524 ATP binding
GO:0016787 hydrolase activity
GO:0043138 3'-5' DNA helicase activity
Biological Process
GO:0006289 nucleotide-excision repair
GO:0032508 DNA duplex unwinding
GO:0036297 interstrand cross-link repair

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Molecular Function
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Biological Process
External links
PDB RCSB:6znq, PDBe:6znq, PDBj:6znq
PDBsum6znq
PubMed33300032
UniProtP50830|YPRA_BACSU Uncharacterized ATP-dependent helicase YprA (Gene Name=yprA)

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