Structure of PDB 6znp Chain B Binding Site BS01

Receptor Information
>6znp Chain B (length=701) Species: 224308 (Bacillus subtilis subsp. subtilis str. 168) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KKSLTELISDLKGNENVVNWHEIEPREAKTRPMPESIDERIKAALSKRGI
DELYTHQYSAFQYVQKGESIVTVTPTASGKTLCYNLPVLQSIAQDETNRA
LYLFPTKALAQDQKSELNEIIDEMGIDIKSFTYDGDTSPAIRQKVRKAGH
IVITNPDMLHSAILPHHTKWVSLFENLKYIVIDELHTYRGVFGSHVANVI
RRLKRICRFYGSDPVFICTSATIANPKELGEQLTGKPMRLVDDNGAPSGR
KHFVFYNPPIVNKIRRSATAEVNELAKEFLKNKVQTIVFARSRVRVEIIL
SHIQELVKKEIGTKSIRGYRGGYLPKERREIERGLREGDILGVVSTNALE
LGVDIGQLQVCVMTGYPGSVASAWQQAGRAGRRHGESLIIMVANSTPIDQ
YIVRHPEYFFNRSPESARINPENLIILVDHLKCAAYELPFRADEEFGAME
VSDILEYLQEEAVLHRNGERYHWASESFPASNISLRSASQENVVIVDQSD
IANVRIIGEMDRFSAMTLLHDEAIYLHEGVQYQVEKLDWDHKKAYVRKVD
VEYYTDANLAVQLKIDKTHYGDVTVNALPTIFKKIKMTTFENIGSGPIHL
PSAAWLETLLLLGISNVLQHIVPVYIMCDRNDVHVVSQITIFLYDHYPGG
IGLAEEVFKRFSDINEAAKQLITHCPCHDGCPSCIGTKAKERILQLLDQM
S
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6znp A skipping rope translocation mechanism in a widespread family of DNA repair helicases.
Resolution3.16 Å
Binding residue
(original residue number in PDB)		T108 K109 Y135 D136 G137 R144 N157 D159 A164 H168 K171 S297 R298 R325 G326 T351 N352 A353 F483 R491 A493 N666
Binding residue
(residue number reindexed from 1)		T106 K107 Y133 D134 G135 R142 N155 D157 A162 H166 K169 S292 R293 R320 G321 T346 N347 A348 F478 R486 A488 N631
Enzymatic activity
Enzyme Commision number 3.6.4.-
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0004386 helicase activity
GO:0005524 ATP binding
GO:0016787 hydrolase activity
GO:0043138 3'-5' DNA helicase activity
Biological Process
GO:0006289 nucleotide-excision repair
GO:0032508 DNA duplex unwinding
GO:0036297 interstrand cross-link repair

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Molecular Function
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Biological Process
External links
PDB RCSB:6znp, PDBe:6znp, PDBj:6znp
PDBsum6znp
PubMed33300032
UniProtP50830|YPRA_BACSU Uncharacterized ATP-dependent helicase YprA (Gene Name=yprA)

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