Structure of PDB 6yx4 Chain B Binding Site BS01
Receptor Information
>6yx4 Chain B (length=103) Species:
326427
(Chloroflexus aggregans DSM 9485) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
ASGMIVTDAGADQPIVFVNRAFSTITGYAPNEVLGRNARFLQGPQTDAAT
VARLREAIAAARPIQERILNYRKDGQPFWNQLSISPVRDETGNVVAFVGV
KTD
Ligand information
Ligand ID
FMN
InChI
InChI=1S/C17H21N4O9P/c1-7-3-9-10(4-8(7)2)21(15-13(18-9)16(25)20-17(26)19-15)5-11(22)14(24)12(23)6-30-31(27,28)29/h3-4,11-12,14,22-24H,5-6H2,1-2H3,(H,20,25,26)(H2,27,28,29)/t11-,12+,14-/m0/s1
InChIKey
FVTCRASFADXXNN-SCRDCRAPSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)CC(C(C(COP(=O)(O)O)O)O)O
OpenEye OEToolkits 1.7.6
Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)C[C@@H]([C@@H]([C@@H](COP(=O)(O)O)O)O)O
ACDLabs 12.01
N=2C(=O)NC(=O)C3=Nc1cc(C)c(C)cc1N(C=23)CC(O)C(O)C(O)COP(=O)(O)O
CACTVS 3.385
Cc1cc2N=C3C(=O)NC(=O)N=C3N(C[CH](O)[CH](O)[CH](O)CO[P](O)(O)=O)c2cc1C
CACTVS 3.385
Cc1cc2N=C3C(=O)NC(=O)N=C3N(C[C@H](O)[C@H](O)[C@H](O)CO[P](O)(O)=O)c2cc1C
Formula
C17 H21 N4 O9 P
Name
FLAVIN MONONUCLEOTIDE;
RIBOFLAVIN MONOPHOSPHATE
ChEMBL
CHEMBL1201794
DrugBank
DB03247
ZINC
ZINC000003831425
PDB chain
6yx4 Chain B Residue 201 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6yx4
The molecular basis of spectral tuning in blue- and red-shifted flavin-binding fluorescent proteins.
Resolution
1.36 Å
Binding residue
(original residue number in PDB)
I52 T54 N84 A85 R86 L88 Q89 V98 R102 I105 N117 L129 I131 F144
Binding residue
(residue number reindexed from 1)
I5 T7 N37 A38 R39 L41 Q42 V51 R55 I58 N70 L82 I84 F97
Annotation score
4
Enzymatic activity
Enzyme Commision number
2.7.13.3
: histidine kinase.
External links
PDB
RCSB:6yx4
,
PDBe:6yx4
,
PDBj:6yx4
PDBsum
6yx4
PubMed
33862085
UniProt
B8GAY9
[
Back to BioLiP
]