Structure of PDB 6ya8 Chain B Binding Site BS01

Receptor Information
>6ya8 Chain B (length=103) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GPGTRTGRLKKPFVKVEDMSQLYRPFYLQLTNMPFINYSIQKPCSPFDKK
GYCECCLQKYEDLETHLLSEQHRNFAQSNQYQVVDDIVSKLVFDFVEYEK
DTP
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain6ya8 Chain B Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6ya8 Structural Basis for the Activation and Target Site Specificity of CDC7 Kinase.
Resolution1.79 Å
Binding residue
(original residue number in PDB)		C296 C299 H309 H315
Binding residue
(residue number reindexed from 1)		C53 C56 H66 H72
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding

View graph for
Molecular Function
External links
PDB RCSB:6ya8, PDBe:6ya8, PDBj:6ya8
PDBsum6ya8
PubMed32521228
UniProtQ9UBU7|DBF4A_HUMAN Protein DBF4 homolog A (Gene Name=DBF4)

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