Structure of PDB 6x0j Chain B Binding Site BS01
Receptor Information
>6x0j Chain B (length=455) Species:
330879
(Aspergillus fumigatus Af293) [
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RLRSTPQDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKI
CFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSFTFLNYLHQKG
RLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPS
SSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTAKMPSGLPQDPRIIHS
SKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMR
DSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRL
ELIEEIYNDMYLQRVKNPDETQWQHRILPERKITRVEHHGPQSRMRIHLK
SSKPESNDVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKPH
RDYRVEMDPSKVSSEAGIWLQGCNERTHGLSDSLLSVLAVRGGEMVQSIF
GEQLE
Ligand information
Ligand ID
NAP
InChI
InChI=1S/C21H28N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1-4,7-8,10-11,13-16,20-21,29-31H,5-6H2,(H7-,22,23,24,25,32,33,34,35,36,37,38,39)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
XJLXINKUBYWONI-NNYOXOHSSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O[P](O)(O)=O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@@](O)(=O)OC[C@H]3O[C@H]([C@H](O[P](O)(O)=O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
Formula
C21 H28 N7 O17 P3
Name
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE;
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE
ChEMBL
CHEMBL295069
DrugBank
DB03461
ZINC
PDB chain
6x0j Chain B Residue 601 [
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Receptor-Ligand Complex Structure
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PDB
6x0j
Trapping conformational states of a flavin-dependent N -monooxygenase in crystallo reveals protein and flavin dynamics.
Resolution
2.335 Å
Binding residue
(original residue number in PDB)
K100 Q102 R144 P217 S254 G255 Q256 S257 E260 R279 N323 Y324 S325 A404 T405 G406
Binding residue
(residue number reindexed from 1)
K71 Q73 R115 P188 S225 G226 Q227 S228 E231 R250 N294 Y295 S296 A371 T372 G373
Annotation score
4
Enzymatic activity
Enzyme Commision number
1.14.13.196
: L-ornithine N(5)-monooxygenase [NAD(P)H].
Gene Ontology
Molecular Function
GO:0000166
nucleotide binding
GO:0004497
monooxygenase activity
GO:0004499
N,N-dimethylaniline monooxygenase activity
GO:0005506
iron ion binding
GO:0031172
ornithine N5-monooxygenase activity
GO:0070401
NADP+ binding
Biological Process
GO:0006696
ergosterol biosynthetic process
GO:0006879
intracellular iron ion homeostasis
GO:0009058
biosynthetic process
GO:0010106
cellular response to iron ion starvation
GO:0019290
siderophore biosynthetic process
GO:0031169
ferrichrome biosynthetic process
GO:0033214
siderophore-dependent iron import into cell
GO:0044550
secondary metabolite biosynthetic process
Cellular Component
GO:0005575
cellular_component
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:6x0j
,
PDBe:6x0j
,
PDBj:6x0j
PDBsum
6x0j
PubMed
32723870
UniProt
E9QYP0
|SIDA_ASPFU L-ornithine N(5)-monooxygenase (Gene Name=sidA)
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