Structure of PDB 6wqp Chain B Binding Site BS01

Receptor Information
>6wqp Chain B (length=354) Species: 1161942 (Ruminococcus champanellensis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SLELLEPPTQMRDLTASQLLDEITIGWNLGNTLDATTTSWLPNPTPAQSE
TAWGCPMTTKAMIDKVKEGGFNTVRVPVSWIDHTGSAPEYQIDEAWMNRV
QEVVNYVIDNDMYCILNIHHENDWLIPTNAQKDSVNARLDAIWTQIATRF
GSYDEHLIFEGMNQPRLVGDPNEWNGGNQEARQVINSYNQTFVNTVRATG
GNNAIRCLMVPTYAASCSSTTVNDFVLPTDTVANKLIVDIHSYSPYNFAL
NTSGTSSFTQSDISQLQWTLQEIYNSFGAKGIPVIIGQFGALNKNNINGR
VLWGENYLRIAKSYNIRCIWWDNNAFDTSGENFGLLNRGTLTWQYPELLE
AMMK
Ligand information
Ligand IDBCT
InChIInChI=1S/CH2O3/c2-1(3)4/h(H2,2,3,4)/p-1
InChIKeyBVKZGUZCCUSVTD-UHFFFAOYSA-M
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(=O)(O)[O-]
CACTVS 3.341OC([O-])=O
ACDLabs 10.04[O-]C(=O)O
FormulaC H O3
NameBICARBONATE ION
ChEMBL
DrugBank
ZINC
PDB chain6wqp Chain B Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6wqp A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.
Resolution1.6 Å
Binding residue
(original residue number in PDB)		N296 N298
Binding residue
(residue number reindexed from 1)		N296 N298
Annotation score4
Enzymatic activity
Enzyme Commision number 3.2.1.4: cellulase.
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Biological Process
GO:0000272 polysaccharide catabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6wqp, PDBe:6wqp, PDBj:6wqp
PDBsum6wqp
PubMed33454012
UniProtD4LAX7

[Back to BioLiP]