Structure of PDB 6whi Chain B Binding Site BS01

Receptor Information
>6whi Chain B (length=304) Species: 287 (Pseudomonas aeruginosa) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VTDPEALLLLPRLSIQNANAISSPLTWGFPSPGAFTGFVHALQRRVGISL
DIELDGVGIVCHRFEAQISQPAGKRTKVFNLTRNPLNRDGSTAAIVEEGR
AHLEVSLLLGVHGDGLDDHPAQEIARQVQEQAGAMRLAGGSILPWCNERF
PAPNAELLMLGGSDEQRRKNQRRLTRRLLPGFALVSREALLQQHLETLRT
TLPEATTLDALLDLCRINFEWQVRDKPGWLVPIPAGYNALSPLYLPGEVR
NARDRETPLRFVENLFGLGEWLSPHRVAALSDLLWYHHAEPDKGLYRWST
PRFV
Ligand information
>6whi Chain M (length=60) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
cuaagaaauucacggcgggcuugauguccgcgucuaccugguucacugcc
guguaggcag
..................................................
..........
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6whi AcrIF9 tethers non-sequence specific dsDNA to the CRISPR RNA-guided surveillance complex.
Resolution4.2 Å
Binding residue
(original residue number in PDB)		N21 A36 G39 F40 H42 A43 R46 R85 N86 P87 R138 G141 R271
Binding residue
(residue number reindexed from 1)		N19 A34 G37 F38 H40 A41 R44 R83 N84 P85 R136 G139 R253
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005515 protein binding
Biological Process
GO:0051607 defense response to virus

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6whi, PDBe:6whi, PDBj:6whi
PDBsum6whi
PubMed32483187
UniProtQ02MM0|CSY2_PSEAB CRISPR-associated protein Csy2 (Gene Name=csy2)

[Back to BioLiP]