Structure of PDB 6w6v Chain B Binding Site BS01 |
| >6w6v Chain B (length=780) Species: 559292 (Saccharomyces cerevisiae S288C)
[Search protein sequence]
[Download receptor structure]
[Download structure with residue number starting from 1]
[View receptor structure]
|
KQLQLAMHNSKAASSTRIFQALPRKLRRRTASHNVRRIPKRMRNRALREM
RKSDKAHGLNAKQLYKARMSIKLLRLASKSTSMKLSMPPEVTSSNCHVRQ
KIKTLKRMIKESSTANPNIKLLNNRMGSYDCTGVNELAPIPKGRVKYTKR
QKHFAWLPTHIWNAKRSHMMKRWGYQMVWAPTQKCFKLTHRLGGDTCSSD
GALCMDSSYIGTIIVKDKSNDSEGDFLKSIIGKLTAERANLRKYREGQVL
FQGLIYSFNEENGEDSTKPLGPCDVFWVQKDTAIIRLHPSIYTQVFNILL
QHKEKLTVQDCRYSLASVTLKGAKALESLASCLRSTEYSKSFEQFKMVSM
ITDHNALPQRCTFAFEAIDPRHLAAPKKLNDSQRKTVNSDDILSLHENYP
QDEINAVFNELCDPESRTQSYNNQNTLKEISARRYKLLTATPNSINKTTV
PFKESDDPSIPLVIIRRLKTRDWIVVLPWFWLLPLWHLLNRIPRMYHIGL
RQFQQIQYENKQLYFPDDYPFTQLGYIENSFYKKEASKTKWDRKPMGKRI
NFEKIKDIHNTKLPAYSGEIGDFFSSDWRFLQILRNGIDYLQRNDKTLEL
MDSKKTGQQGVRDINCVNDVLEFCKDYEAKTKAMSLSIEENIPVALCKNR
KCQFSSSFSLTFFPRCIIAVSCTLLERGHPKDNARIYQVPEKDLEHWLQL
AKGVYRPNGRKDHDLKIPLPEVHDLIGFITSGTYHLNCGNGMGIGFIDHH
AAIRQPTRYVLIRNVGTNTYRLGEWSKISV |
|
| >6w6v Chain A (length=294)
[Search RNA sequence]
[Download ligand structure]
[Download structure with residue number starting from 1]
[View ligand structure]
|
auccaugaccaaagaaucgucacaaaucgaagcuuacaaaauggaguaaa
auuuuacucaguaauaugcuuuggguugaaagucucccaccaauucguau
gcggaaaacguaaugagauuuaaaaauaaaucaacucauuaaggaggaug
ccgguauucugcuucuugaccugguaccucuaggguacugguguucggua
cuggauuccgauggaaucuaaaccauaguuaugacgauugcucuuuccug
gaucgaguaacccaauggagcuuacuauucuugguccauggauu |
<<<<<<<<<<<<<.<<<<<<<......<<<<<<..........<<<<<<<
..>>>>>>>........>>>>>>{......[[.((((.<<<.........
<<<.....>>><<<<<<.................>>>>>>.<<.<<<<<<
<<>>>>>>>>.>>.......<<<<<<<<.<<>>>>>>>>>>.....>>>.
..<<<<<<<...>>>>>>>.............>>>>>>><<<<..<<<.>
>>..>>>>...}....))))]]...>....>>>>>>.>>>>>>. |
|
| Global view | Local view | Structure summary |
[Spin on]
[Spin off]
[Reset]
[High quality]
[Low quality]
[White background]
[Black background]
|
[Spin on]
[Spin off]
[Reset]
[High quality]
[Low quality]
[White background]
[Black background]
|
| PDB | 6w6v Cryo-EM structure of catalytic ribonucleoprotein complex RNase MRP. |
| Resolution | 3.0 Å |
Binding residue
(original residue number in PDB) | R87 Q90 L92 P93 R94 R97 R98 R99 S102 V105 R106 R111 R115 Y148 M152 K155 L156 R158 L159 K162 S163 S165 V174 T175 N178 C179 H180 V181 N199 R208 M209 G210 K225 V228 K229 K232 R233 A247 K248 R249 H251 T265 K267 F269 K270 R274 D278 T279 C280 F425 K429 D436 A458 K460 N463 L510 K511 S514 I528 H570 R626 K627 P628 M629 K631 E636 K637 R772 G773 H808 Y829 L831 T864 |
Binding residue
(residue number reindexed from 1) | R17 Q20 L22 P23 R24 R27 R28 R29 S32 V35 R36 R41 R45 Y65 M69 K72 L73 R75 L76 K79 S80 S82 V91 T92 N95 C96 H97 V98 N116 R125 M126 G127 K142 V145 K146 K149 R150 A164 K165 R166 H168 T182 K184 F186 K187 R191 D195 T196 C197 F342 K346 D353 A375 K377 N380 L427 K428 S431 I445 H487 R543 K544 P545 M546 K548 E553 K554 R677 G678 H713 Y734 L736 T769 |
|
|
| Enzyme Commision number |
3.1.26.5: ribonuclease P. |
|
|
|
|
|
