Structure of PDB 6vqw Chain B Binding Site BS01

Receptor Information
>6vqw Chain B (length=242) Species: 287 (Pseudomonas aeruginosa) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AKQLYFPLPGSGYHLLAPLFPTSLVHHVHALLREARFGDAAKAAREARSR
QESWPHGFSEYPNLAIQKFGGTKPQNISQLNNERRGENWLLPSLPPNWQR
QNVNAPMRHSSVFEHDFGRTPEVSRLTRTLQRFLAKTVHNNLAIRQRRAQ
LVAQICDEALQYAARLRELEPGWSATPGCQLHDAEQLWLDPLRQRRLRGD
WPAEVGNRFANWLNRAVEAAQWSQELSKELTMFKEILEDERD
Ligand information
>6vqw Chain K (length=40) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
cuaagaaauucacggcgggcuugauguccgcgucuaccug
........................................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6vqw Inhibition mechanisms of AcrF9, AcrF8, and AcrF6 against type I-F CRISPR-Cas complex revealed by cryo-EM.
Resolution3.42 Å
Binding residue
(original residue number in PDB)		K176 Q177 L178 Y179 Y187
Binding residue
(residue number reindexed from 1)		K2 Q3 L4 Y5 Y13
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005515 protein binding
Biological Process
GO:0051607 defense response to virus

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6vqw, PDBe:6vqw, PDBj:6vqw
PDBsum6vqw
PubMed32170016
UniProtQ02ML9|CSY1_PSEAB CRISPR-associated protein Csy1 (Gene Name=csy1)

[Back to BioLiP]