Structure of PDB 6v7b Chain B Binding Site BS01

Receptor Information

>6v7b Chain B (length=119) Species: 1805492 (Pyrobaculum filamentous virus 1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

IAETLTEKHTLGIEKVVATDSWRVGITSREKKLERINISAEISRRIQDEA
IAYARNKGIPYLPGINGIAWKLLRLKWLGYTDQINVVMRTVPAEWRDFLT
QIMENTQMESMYSELRKVR

Ligand information

>6v7b Chain 1 (length=323) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatata

Receptor-Ligand Complex Structure

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Structure summary

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PDB	6v7b Structure of a filamentous virus uncovers familial ties within the archaeal virosphere.
Resolution	3.4 Å
Binding residue (original residue number in PDB)	H18 K24 W31 R38 R53 Q56 P72 R83
Binding residue (residue number reindexed from 1)	H9 K15 W22 R29 R44 Q47 P63 R74

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0003677	DNA binding

	Cellular Component
GO:0019029	helical viral capsid
GO:0044423	virion component

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Molecular Function

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Cellular Component

External links

PDB	RCSB:6v7b, PDBe:6v7b, PDBj:6v7b
PDBsum	6v7b
PubMed	32368353
UniProt	A0A140F3K6\|CAPS1_PFV1 Major capsid protein 1

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