Structure of PDB 6t2z Chain B Binding Site BS01

Receptor Information
>6t2z Chain B (length=121) Species: 1895 (Streptomyces avidinii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AGITGTWYNQLGSTFIVTAGADGALTGTYESAAGKAESRYVLTGRYDSAP
ATDGSGTALGWTVAWKNNYRNAHSATTWSGQYVGGAEARINTQWLLTMGA
TEANGWASTLVGHDTFTKVKP
Ligand information
Ligand IDHL9
InChIInChI=1S/C20H29N5O2S/c26-18(4-2-1-3-17-19-16(13-28-17)23-20(27)24-19)22-14-7-11-25(12-8-14)15-5-9-21-10-6-15/h5-6,9-10,14,16-17,19H,1-4,7-8,11-13H2,(H,22,26)(H2,23,24,27)/t16-,17-,19-/m0/s1
InChIKeyGEHXEZPHNHPYOB-LNLFQRSKSA-N
SMILES
SoftwareSMILES
CACTVS 3.385O=C(CCCC[C@@H]1SC[C@@H]2NC(=O)N[C@H]12)NC3CCN(CC3)c4ccncc4
OpenEye OEToolkits 2.0.7c1cnccc1N2CCC(CC2)NC(=O)CCCCC3C4C(CS3)NC(=O)N4
CACTVS 3.385O=C(CCCC[CH]1SC[CH]2NC(=O)N[CH]12)NC3CCN(CC3)c4ccncc4
OpenEye OEToolkits 2.0.7c1cnccc1N2CCC(CC2)NC(=O)CCCC[C@H]3[C@@H]4[C@H](CS3)NC(=O)N4
FormulaC20 H29 N5 O2 S
Name5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-(1-pyridin-4-ylpiperidin-4-yl)pentanamide
ChEMBL
DrugBank
ZINC
PDB chain6t2z Chain B Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6t2z An Artificial Cofactor Catalyzing the Baylis-Hillman Reaction with Designed Streptavidin as Protein Host*.
Resolution1.35 Å
Binding residue
(original residue number in PDB)
S27 Y43 S45 G48 K49 W79 T90 W108 L110 D128
Binding residue
(residue number reindexed from 1)
S13 Y29 S31 G34 K35 W65 T76 W94 L96 D114
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0005576 extracellular region

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Molecular Function

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Cellular Component
External links
PDB RCSB:6t2z, PDBe:6t2z, PDBj:6t2z
PDBsum6t2z
PubMed33400831
UniProtP22629|SAV_STRAV Streptavidin

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