Structure of PDB 6rid Chain B Binding Site BS01

Receptor Information
>6rid Chain B (length=1120) Species: 502057 (Vaccinia virus GLV-1h68) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EMDQRLGYKFLVPDPKAGVFYRPLHFQYVSYSNFILHRLHEILTVKRPLL
SFKNNTERIMIEISNVKVTPPDYSPIIASIKGKSYDALATFTVNIFKEVM
TKEGISITKISSYEGHLIKIPLLIGYGNKNPLDTAKYLVPNVIGGVFINK
QSVEKVGINLVEKITTWPKFRVVKPNSFTFSFSSVSPPNVLPTRYRHYKI
SLDISQLEALNISSTKTFITVNIVLLSQYLSRVSLEFIRRSLSYDMPPEV
VYLVNAIIDSAKRITESITDFNIDTYINDLVEAEHIKQKSQLTINEFKYE
MLHNFLPHMNYTPDQLKGFYMISLLRKFLYCIFHTSRYPDRDSMVCHRIL
TYGKYFETLAHDELENYIGNIRNDIMNNHKNRGTYAVNIHVLTTPGLNHA
FSSLLSGKSDGSYRTHPHYSWMQNISIPRSVGFYPSVRKYHPSQYLYFCS
SDVPERGPQVGLVSQLSVLSSITNILTSEYLDLEKKICEYIRSYYKDDIS
YFETGFPITIENALVASLNPNMICDFVTDFRRRKRMGFFGNLEVGITLVR
DHMNEIRINIGAGRLVRPFLVVDNGELMMDVCPELESRLDDMTFSDIQKE
FPHVIEMVDIEQFTFSNVCESVQKFRMMSKDERKQYDLCDFPAEFRDGYV
ASSLVGINHNSGPRAILGCAQAKQAISCLSSDIRNKIDNGIHLMYPERPI
VISKALETSKIAANCFGQHVTIALMSYKGINQEDGIIIKKQFIQRGGLDI
VTAKKHQVEIPLENFNNAYSKLESNGLVRLNAFLESGDAMARNISSSFDV
SEKYTDMYKSRVERVQVELTDKVKVRVLTMKERRPILGDKFTTRTSQKGT
VAYVADETELPYDENGITPDVIINSTSIFSRKTISMLIEVILTAAYSAKP
YNNKGENRPVCFPSSNETSIDTYMQFAKQCYEHSNPKLSDEELSDKIFCE
KILYDPETDKPYASKVFFGPIYYLRLRHLTQDKATVRCRGKKTKLIRQAN
EGRKRGGGIKFGEMERDCLIAHGAANTITEVLKDSEEDYQDVYVCENCGD
IAAQIKGINTCLRCSKLNLSPLLTKIDTTHVSKVFLTQMNARGVKVKLDF
ERRPPSFYKPLDKVDLKPSF
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6rid Structural Basis of Poxvirus Transcription: Transcribing and Capping Vaccinia Complexes.
Resolution2.9 Å
Binding residue
(original residue number in PDB)		N711 K777 R1045 K1046 K1052
Binding residue
(residue number reindexed from 1)		N689 K755 R1003 K1004 K1010
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Fri Nov 15 17:57:29 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '6rid', asym_id = 'B', bs = 'BS01', title = 'Structural Basis of Poxvirus Transcription: Transcribing and Capping Vaccinia Complexes.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='6rid', asym_id='B', bs='BS01', title='Structural Basis of Poxvirus Transcription: Transcribing and Capping Vaccinia Complexes.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0003677,0003899,0006351,0032549', uniprot = '', pdbid = '6rid', asym_id = 'B'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003677,0003899,0006351,0032549', uniprot='', pdbid='6rid', asym_id='B')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>