Structure of PDB 6r88 Chain B Binding Site BS01

Receptor Information
>6r88 Chain B (length=238) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ELKIGVPLRVSYKEFVSQIRGTENMFKGFCIDVFTAAVNLLPYAVPVKFI
PYGNGKENPSYTHMVEMITTGNFDGVVGDVAIVTNRTKIVDFTQPYAASG
LVVVAPGGTPIKGIESLRERDDPIGYQVGSFAESYLRNELNISESRLVPL
GTPEAYAKALKDGPSKGGVAAIVDERPYVELFLSSNCAYRIVGQEFTKSG
WGFAFPRDSPLAIDLSTAILELAENGDLQRIHDKWLMC
Ligand information
Ligand IDGLY
InChIInChI=1S/C2H5NO2/c3-1-2(4)5/h1,3H2,(H,4,5)
InChIKeyDHMQDGOQFOQNFH-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(C(=O)O)N
CACTVS 3.341NCC(O)=O
ACDLabs 10.04O=C(O)CN
FormulaC2 H5 N O2
NameGLYCINE
ChEMBLCHEMBL773
DrugBankDB00145
ZINCZINC000004658552
PDB chain6r88 Chain B Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6r88 The structural bases for agonist diversity in anArabidopsis thalianaglutamate receptor-like channel.
Resolution1.6 Å
Binding residue
(original residue number in PDB)		Y63 A83 R88 S132 F133 E177
Binding residue
(residue number reindexed from 1)		Y61 A81 R86 S130 F131 E175
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0015276 ligand-gated monoatomic ion channel activity
Cellular Component
GO:0016020 membrane

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Molecular Function
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Cellular Component
External links
PDB RCSB:6r88, PDBe:6r88, PDBj:6r88
PDBsum6r88
PubMed31871183
UniProtQ9C8E7|GLR33_ARATH Glutamate receptor 3.3 (Gene Name=GLR3.3)

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