Structure of PDB 6pt9 Chain B Binding Site BS01

Receptor Information
>6pt9 Chain B (length=473) Species: 1872678 (Pseudoalteromonas fuliginea) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KKPNVLILLFDDMRFDTFSYRNGPVSTPNIDALANEGTRFDQAMTSTGLS
SPSRAAMFTGRWGHKTGLDDNVGLYHSRLSELSLSEGSVIKRATSIGYDV
SYVGKWHLGAQGPALRGANFMWGHDKDEERNGRPFTPYQTQKNVARMNAG
ERDKNGEKHDYYKTLPGTYADTVTAKEVNEGKLMLQNAAKSDKPFFGIVS
FEQPHPPYRVPEPYASMYDYKDIKLPKNFGIKRKHKPMAQDDIWWPWHDV
SHMSETDWRKAHSFYYGAIAMIDHAVGELINTAKEEGLYDDLHIILVGDQ
GSMLGEHNLYDKGPYAYDELMRMPLIIRDPSLEPKIINRQVSMLDIAPTL
RQWMTLPLDGDEDGRSLLPLMKQGDSADAGKDDISLYAYEWYNGGWFGIR
AIRTPEMKFVWNPGDSRDELYDLKNDPYEITNQIDNPKYKKQLTDLVHKM
AGELNRIDDPSLTKFNHHMKAFL
Ligand information
Ligand ID9RN
InChIInChI=1S/C6H10O5/c7-3-2-1-10-5(3)4(8)6(9)11-2/h2-9H,1H2/t2-,3+,4-,5+,6+/m1/s1
InChIKeyDCQFFOLNJVGHLW-RDQKPOQOSA-N
SMILES
SoftwareSMILES
CACTVS 3.385O[C@H]1O[C@@H]2CO[C@H]([C@H]1O)[C@H]2O
ACDLabs 12.01OC1OC2COC(C2O)C1O
OpenEye OEToolkits 2.0.7C1[C@@H]2[C@@H]([C@H](O1)[C@H]([C@H](O2)O)O)O
OpenEye OEToolkits 2.0.7C1C2C(C(O1)C(C(O2)O)O)O
CACTVS 3.385O[CH]1O[CH]2CO[CH]([CH]1O)[CH]2O
FormulaC6 H10 O5
Name3,6-anhydro-alpha-D-galactopyranose
ChEMBL
DrugBank
ZINC
PDB chain6pt9 Chain B Residue 602 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6pt9 Insights into the kappa / iota-carrageenan metabolism pathway of some marinePseudoalteromonasspecies.
Resolution1.66 Å
Binding residue
(original residue number in PDB)		H239 W279 W281 D345 Y426 N427
Binding residue
(residue number reindexed from 1)		H205 W245 W247 D311 Y392 N393
Annotation score1
External links