Structure of PDB 6pg2 Chain B Binding Site BS01

Receptor Information

>6pg2 Chain B (length=188) Species: 83333 (Escherichia coli K-12) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

AQYEDGKQYTTLEKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKL
PEGVKMTKYHVNFMGGDLGKDLTQAWAVAMALGVEDKVTVPLFEGVQKTQ
TIRSASDIRDVFINAGIKGEEYDAAWNSFVVKSLVAQQEKAAADVQLRGV
PAMFVNGKYQLNPQGMDTSNMDVFVQQYADTVKYLSEK

Ligand information

Ligand ID

InChI

InChI=1S/Cu/q+2

InChIKey

JPVYNHNXODAKFH-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Cu+2]
CACTVS 3.341	[Cu++]

Formula

Name

COPPER (II) ION

PDB chain

6pg2 Chain B Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	6pg2 Rapid Elaboration of Fragments into Leads by X-ray Crystallographic Screening of Parallel Chemical Libraries (REFiL X ).
Resolution	1.91 Å
Binding residue (original residue number in PDB)	A1 E4
Binding residue (residue number reindexed from 1)	A1 E4
Annotation score	3

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0003756	protein disulfide isomerase activity
GO:0005515	protein binding
GO:0015035	protein-disulfide reductase activity
GO:0015036	disulfide oxidoreductase activity
GO:0016491	oxidoreductase activity

	Biological Process
GO:0071236	cellular response to antibiotic

	Cellular Component
GO:0030288	outer membrane-bounded periplasmic space
GO:0042597	periplasmic space

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component

External links

PDB	RCSB:6pg2, PDBe:6pg2, PDBj:6pg2
PDBsum	6pg2
PubMed	32529824
UniProt	P0AEG4\|DSBA_ECOLI Thiol:disulfide interchange protein DsbA (Gene Name=dsbA)

[Back to BioLiP]