Structure of PDB 6otf Chain B Binding Site BS01

Receptor Information
>6otf Chain B (length=521) Species: 52276 (Snow Mountain virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TDGAAGLVPESNNEVMALEPVAGAALAAPVTGQTNIIDPWIRANFVQAPN
GEFTVSPRNAPGEVLLNLELGPELNPYLAHLARMYNGYAGGMEVQVMLAG
NAFTAGKLVFAAVPPHFPVENLSPQQITMFPHVIIDVRTLEPVLLPLPDV
RNNFFHYNQKDDPKMRIVAMLYTPLRSNGSGDDVFTVSCRVLTRPSPDFD
FTYLVPPTVESKTKPFTLPILTLGELSNSRFPVSIDQMYTSPNEVISVQC
QNGRCTLDGELQGTTQLQVSGICAFKGEVTAHLQDNDHLYNITITNLNGS
PFDPSEDIPAPLGVPDFQGRVFGVITQRDKQNAAGQSQPANRGHDAVVPT
YTAQYTPKLGQVQIGTWQTDDLKVNQPVKFTPVGLNDTEHFNQWVVPRYA
GALNLNTNLAPSVAPVFPGERLLFFRSYLPLKGGYGNPAIDCLLPQEWVQ
HFYQEAAPSMSEVALVRYINPDTGRALFEAKLHRAGFMTVSSNTSAPVVV
PANGYFRFDSWVNQFYSLAPM
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain6otf Chain B Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6otf High-resolution cryo-EM structures of outbreak strain human norovirus shells reveal size variations.
Resolution3.1 Å
Binding residue
(original residue number in PDB)		H293 Q295 H299
Binding residue
(residue number reindexed from 1)		H282 Q284 H288
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0044423 virion component

View graph for
Cellular Component
External links
PDB RCSB:6otf, PDBe:6otf, PDBj:6otf
PDBsum6otf
PubMed31182604
UniProtQ80RD6

[Back to BioLiP]