Structure of PDB 6omp Chain B Binding Site BS01

Receptor Information

>6omp Chain B (length=356) Species: 58346 (Streptomyces platensis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

MEKLWLNSADSHVLEPDDLWERALPAALRDRAPRCVRDNGRETVYVDGQV
VRRDPLDFADAMRPPGALDHHIRLKDLDDQGIWGEVVFPSRGLWTAVMTD
PVLARECIKVYNDWLKSDFLSLSPRLVGAAMVSMLDTDDAVAELRRAADL
GYQTVFLAATPPPGREFNMDVWEPLWAAAEEAGMTVSIHIGTGADTVVAR
GPGGAVINYVETLFPAQRAVAQLVASGALDRHPGLRVLIAEAGCAWVPAL
ADRMDEAYRQHGMFVRPKLSMLPGELVRRQVYASFQHDETAIGAVTAMNY
TNVLWGSDYPHLEGTFPRTQEVVTELFAGVDPEVRDLITRRNFTDLFTVP
ALPATV

Ligand information

Ligand ID

InChI

InChI=1S/Mn/q+2

InChIKey

WAEMQWOKJMHJLA-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Mn+2]
CACTVS 3.341	[Mn++]

Formula

Name

MANGANESE (II) ION

PDB chain

6omp Chain B Residue 406 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	6omp Characterization and Crystal Structure of a Nonheme Diiron Monooxygenase Involved in Platensimycin and Platencin Biosynthesis.
Resolution	1.7 Å
Binding residue (original residue number in PDB)	D10 H12 H189 E241 D308
Binding residue (residue number reindexed from 1)	D10 H12 H189 E241 D308
Annotation score	4

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0016787	hydrolase activity
GO:0016829	lyase activity
GO:0016831	carboxy-lyase activity
GO:0046872	metal ion binding

	Biological Process
GO:0019748	secondary metabolic process

	Cellular Component
GO:0005737	cytoplasm

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component

External links

PDB	RCSB:6omp, PDBe:6omp, PDBj:6omp
PDBsum	6omp
PubMed	31291107
UniProt	A0A0A0UVH9

[Back to BioLiP]