Structure of PDB 6o78 Chain B Binding Site BS01
Receptor Information
>6o78 Chain B (length=244) Species:
342948
(Thermococcus onnurineus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
PKFIAVKLIPKGPFRDIPRADTLFGAIGNAISAIHGQSAVEELVDAFVGG
ARISSAFPYSGDTYYLPKPLSVEPALEGILTEEERYTTAKRLRKAKYLDL
KNFELALRLRPFTIPEEIPYARVDVPRFWEEIRFREKSGVYFLYSGPREV
FDGYIAPAMRFLGDLFEVEFHEMKIDAPGSEYSVTLSNALPTKTPVLWRL
LRKRMTFIAEGSIVKNDPGGMERLELEVYVYGLTFPLGVELPEG
Ligand information
>6o78 Chain E (length=3) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
aaa
...
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6o78
Second Messenger cA4Formation within the Composite Csm1 Palm Pocket of Type III-A CRISPR-Cas Csm Complex and Its Release Path.
Resolution
2.8 Å
Binding residue
(original residue number in PDB)
K94 R97
Binding residue
(residue number reindexed from 1)
K90 R93
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003723
RNA binding
GO:0005515
protein binding
Biological Process
GO:0051607
defense response to virus
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:6o78
,
PDBe:6o78
,
PDBj:6o78
PDBsum
6o78
PubMed
31326272
UniProt
B6YWC1
|CSM4_THEON CRISPR system Cms protein Csm4 (Gene Name=csm4)
[
Back to BioLiP
]