Structure of PDB 6o5k Chain B Binding Site BS01

Receptor Information
>6o5k Chain B (length=43) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
CTSCEDNAPATSYCVECSEPLCETCVEAHQRVKYTKDHTVRST
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain6o5k Chain B Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6o5k A Dissection of Oligomerization by the TRIM28 Tripartite Motif and the Interaction with Members of the Krab-ZFP Family.
Resolution1.6 Å
Binding residue
(original residue number in PDB)		C154 C157 C175 C178
Binding residue
(residue number reindexed from 1)		C1 C4 C22 C25
Annotation score4
Enzymatic activity
Enzyme Commision number 2.3.2.27: RING-type E3 ubiquitin transferase.
Gene Ontology
Molecular Function
GO:0008270 zinc ion binding

View graph for
Molecular Function
External links
PDB RCSB:6o5k, PDBe:6o5k, PDBj:6o5k
PDBsum6o5k
PubMed31078555
UniProtQ62318|TIF1B_MOUSE Transcription intermediary factor 1-beta (Gene Name=Trim28)

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