Structure of PDB 6nlr Chain B Binding Site BS01

Receptor Information
>6nlr Chain B (length=273) Species: 267410 (Listeria monocytogenes serotype 4b str. H7858) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MKRDGHTHTEFCPHGTHDDVEEMVLKAIELDFDEYSIVEHAPLSSEFMKN
TAGDKEAVTTASMAMSDLPYYFKKMNHIKKKYASDLLIHIGFEVDYLIGY
EDFTRDFLNEYGPQTDDGVLSLHFLEGQGGFRSIDFSAEDYNEGIVQFYG
GFEQAQLAYLEGVKQSIEADLGLFKPRRMGHISLCQKFQQFFGEDTSDFS
EEVMEKFRVILALVKKRDYELDFNTAGLFKPLCGETYPPKKIVTLASELQ
IPFVYGSDSHGVQDIGRGYSTYC
Ligand information
Ligand IDCO
InChIInChI=1S/Co/q+2
InChIKeyXLJKHNWPARRRJB-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Co+2]
CACTVS 3.341[Co++]
FormulaCo
NameCOBALT (II) ION
ChEMBL
DrugBankDB14205
ZINC
PDB chain6nlr Chain B Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6nlr High-Throughput PIXE as an Essential Quantitative Assay for Accurate Metalloprotein Structural Analysis: Development and Application.
Resolution2.1 Å
Binding residue
(original residue number in PDB)		H6 H8 E93 D258
Binding residue
(residue number reindexed from 1)		H6 H8 E93 D258
Annotation score1
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Mon Nov 25 07:19:41 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '6nlr', asym_id = 'B', bs = 'BS01', title = 'High-Throughput PIXE as an Essential Quantitativ...tructural Analysis: Development and Application. '
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='6nlr', asym_id='B', bs='BS01', title='High-Throughput PIXE as an Essential Quantitativ...tructural Analysis: Development and Application. ')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0000105,0003824,0004401', uniprot = '', pdbid = '6nlr', asym_id = 'B'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0000105,0003824,0004401', uniprot='', pdbid='6nlr', asym_id='B')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>