Structure of PDB 6njd Chain B Binding Site BS01

Receptor Information
>6njd Chain B (length=191) Species: 446 (Legionella pneumophila) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
FLNQNCAEMMIKKAAQLILGSDLDFEYTRGIQDIQVDLGPAFMFSPDEEK
TLWVSGKNQETLEKDLATLNKSSVYFFRTGTQGGAGHWQVLYYEAAKSGW
VSYSSQSNHFQVTDSNGKLTASGKGLLVPHANWGKENGNYAFLLVNASAE
NIIHAANFVYILRTQNEVAAIEYCALNHEFHPEIKRTARAK
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain6njd Chain B Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6njd A bacterial effector deubiquitinase specifically hydrolyses linear ubiquitin chains to inhibit host inflammatory signalling.
Resolution2.05 Å
Binding residue
(original residue number in PDB)		H185 E186
Binding residue
(residue number reindexed from 1)		H178 E179
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6njd, PDBe:6njd, PDBj:6njd
PDBsum6njd
PubMed31110362
UniProtA0A509GV61

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