Structure of PDB 6lpe Chain B Binding Site BS01

Receptor Information
>6lpe Chain B (length=172) Species: 419950 (Phascolosoma esculenta) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SLSRPRQNYHAESESGVNKQINLELYASYVYQSMAWYFDRDDVALKGFHK
FFKKASEEEREHAEKLMKFQNQRGGRIVLSDIKRPDHDEWGTGLEAMEVA
LNLEKNVNQSLLDLHKVAEKNGDDQMQDWIESHFLTEQVEAIKELSDHIT
NLKRVGPGLGEYMFDKETLDGD
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain6lpe Chain B Residue 202 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6lpe Structural comparison of two ferritins from the marine invertebrate Phascolosoma esculenta.
Resolution1.99 Å
Binding residue
(original residue number in PDB)		E25 E60 H63
Binding residue
(residue number reindexed from 1)		E24 E59 H62
Annotation score1
Enzymatic activity
Enzyme Commision number 1.16.3.1: ferroxidase.
Gene Ontology
Molecular Function
GO:0004322 ferroxidase activity
GO:0008198 ferrous iron binding
GO:0008199 ferric iron binding
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
Biological Process
GO:0006826 iron ion transport
GO:0006879 intracellular iron ion homeostasis
GO:0006880 intracellular sequestering of iron ion
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6lpe, PDBe:6lpe, PDBj:6lpe
PDBsum6lpe
PubMed33448656
UniProtB3TFG2

[Back to BioLiP]