Structure of PDB 6kut Chain B Binding Site BS01

Receptor Information
>6kut Chain B (length=696) Species: 1173138 (Influenza D virus (D/swine/Oklahoma/1334/2011)) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MEINPYLLMLNNDITSMISLTYPYTGAPPMSHGTSTKYSMETVSRTYSYS
RTKKEVPSGIFPIERRKFCNTIEDKENLEKPNGNVDINFMLSLAEMLEEK
MGKGFFKFCANEAEAEILKMHFSKLTEGRQTYDWTSERNMPAATALQLTV
DAIQETQGTFKGTTMVEYCNKILEMMDWPEVKFKKVTLMITKIGREEFIK
RICTINTMAKDGERGKYKRRAIATPGMGIRPFSKIVETLAQKICERLAES
GLPEKKAKLKTTVSSTNSKLQEGQFMVNITGDNSKWNECQQPEAYLAMLA
YITKDSSNLMKDLCSVAPTLFCNKYVKMGQGFRAKNKRKTKEIVIPAKKM
KERKELMNAEWRDLFETIEPYMDGECCFLGGGMLMGMFNMLSTVFGVMTL
NYREERNCYWTGLQSSDDFVLFCISRTWPEMEMTILKFIAVCKLMGINMS
LEKSYGCLPELFEFTSMFFSGDFVSNIALELPAFTTAGMNEGTDFTAAMS
VIRTNMINNGLSPGTALMALRICLQEFRATYRVHPYDSGVKNHRMKIIRK
FIETIENKDGLLISDGGKLMNNISSLHIPEEILKEDLMDPSYRNRVFNPR
NPFTQFAVVSTHSFRTRSNRTMALEEKRYQVVCNMYRSVFESADVNTPIG
SMSMGEAIEAKILDRARTQFENGIIGGEEYSEIKRLIEDAKRQRLS
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6kut Structural insight into RNA synthesis by influenza D polymerase.
Resolution4.1 Å
Binding residue
(original residue number in PDB)		A558 R561 H563 N571 H572
Binding residue
(residue number reindexed from 1)		A529 R532 H534 N542 H543
Enzymatic activity
Enzyme Commision number 2.7.7.48: RNA-directed RNA polymerase.
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003723 RNA binding
GO:0003968 RNA-dependent RNA polymerase activity
GO:0034062 5'-3' RNA polymerase activity
Biological Process
GO:0001172 RNA-templated transcription
GO:0006351 DNA-templated transcription
GO:0019079 viral genome replication
GO:0039694 viral RNA genome replication

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6kut, PDBe:6kut, PDBj:6kut
PDBsum6kut
PubMed31209309
UniProtK9LH03

[Back to BioLiP]